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Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference

1. The estimation of abundance and distribution and factors governing patterns in these parameters is central to the field of ecology. The continued development of hierarchical models that best utilize available information to inform these processes is a key goal of quantitative ecologists. However,...

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Autores principales: Riecke, Thomas V., Gibson, Dan, Kéry, Marc, Schaub, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8717348/
https://www.ncbi.nlm.nih.gov/pubmed/35003662
http://dx.doi.org/10.1002/ece3.8410
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author Riecke, Thomas V.
Gibson, Dan
Kéry, Marc
Schaub, Michael
author_facet Riecke, Thomas V.
Gibson, Dan
Kéry, Marc
Schaub, Michael
author_sort Riecke, Thomas V.
collection PubMed
description 1. The estimation of abundance and distribution and factors governing patterns in these parameters is central to the field of ecology. The continued development of hierarchical models that best utilize available information to inform these processes is a key goal of quantitative ecologists. However, much remains to be learned about simultaneously modeling true abundance, presence, and trajectories of ecological communities. 2. Simultaneous modeling of the population dynamics of multiple species provides an interesting mechanism to examine patterns in community processes and, as we emphasize herein, to improve species‐specific estimates by leveraging detection information among species. Here, we demonstrate a simple but effective approach to share information about observation parameters among species in hierarchical community abundance and occupancy models, where we use shared random effects among species to account for spatiotemporal heterogeneity in detection probability. 3. We demonstrate the efficacy of our modeling approach using simulated abundance data, where we recover well our simulated parameters using N‐mixture models. Our approach substantially increases precision in estimates of abundance compared with models that do not share detection information among species. We then expand this model and apply it to repeated detection/non‐detection data collected on six species of tits (Paridae) breeding at 119 1 km(2) sampling sites across a P. montanus hybrid zone in northern Switzerland (2004–2020). We find strong impacts of forest cover and elevation on population persistence and colonization in all species. We also demonstrate evidence for interspecific competition on population persistence and colonization probabilities, where the presence of marsh tits reduces population persistence and colonization probability of sympatric willow tits, potentially decreasing gene flow among willow tit subspecies. 4. While conceptually simple, our results have important implications for the future modeling of population abundance, colonization, persistence, and trajectories in community frameworks. We suggest potential extensions of our modeling in this paper and discuss how leveraging data from multiple species can improve model performance and sharpen ecological inference.
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spelling pubmed-87173482022-01-06 Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference Riecke, Thomas V. Gibson, Dan Kéry, Marc Schaub, Michael Ecol Evol Research Articles 1. The estimation of abundance and distribution and factors governing patterns in these parameters is central to the field of ecology. The continued development of hierarchical models that best utilize available information to inform these processes is a key goal of quantitative ecologists. However, much remains to be learned about simultaneously modeling true abundance, presence, and trajectories of ecological communities. 2. Simultaneous modeling of the population dynamics of multiple species provides an interesting mechanism to examine patterns in community processes and, as we emphasize herein, to improve species‐specific estimates by leveraging detection information among species. Here, we demonstrate a simple but effective approach to share information about observation parameters among species in hierarchical community abundance and occupancy models, where we use shared random effects among species to account for spatiotemporal heterogeneity in detection probability. 3. We demonstrate the efficacy of our modeling approach using simulated abundance data, where we recover well our simulated parameters using N‐mixture models. Our approach substantially increases precision in estimates of abundance compared with models that do not share detection information among species. We then expand this model and apply it to repeated detection/non‐detection data collected on six species of tits (Paridae) breeding at 119 1 km(2) sampling sites across a P. montanus hybrid zone in northern Switzerland (2004–2020). We find strong impacts of forest cover and elevation on population persistence and colonization in all species. We also demonstrate evidence for interspecific competition on population persistence and colonization probabilities, where the presence of marsh tits reduces population persistence and colonization probability of sympatric willow tits, potentially decreasing gene flow among willow tit subspecies. 4. While conceptually simple, our results have important implications for the future modeling of population abundance, colonization, persistence, and trajectories in community frameworks. We suggest potential extensions of our modeling in this paper and discuss how leveraging data from multiple species can improve model performance and sharpen ecological inference. John Wiley and Sons Inc. 2021-12-07 /pmc/articles/PMC8717348/ /pubmed/35003662 http://dx.doi.org/10.1002/ece3.8410 Text en © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Riecke, Thomas V.
Gibson, Dan
Kéry, Marc
Schaub, Michael
Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
title Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
title_full Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
title_fullStr Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
title_full_unstemmed Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
title_short Sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
title_sort sharing detection heterogeneity information among species in community models of occupancy and abundance can strengthen inference
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8717348/
https://www.ncbi.nlm.nih.gov/pubmed/35003662
http://dx.doi.org/10.1002/ece3.8410
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