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Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()

BACKGROUND: We designed an algorithm to assess COVID-19 patients severity and dynamic intubation needs and predict their length of stay using the breathing frequency (BF) and oxygen saturation (SpO(2)) signals. METHODS: We recorded the BF and SpO(2) signals for confirmed COVID-19 patients admitted t...

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Autores principales: Boussen, Salah, Cordier, Pierre-Yves, Malet, Arthur, Simeone, Pierre, Cataldi, Sophie, Vaisse, Camille, Roche, Xavier, Castelli, Alexandre, Assal, Mehdi, Pepin, Guillaume, Cot, Kevin, Denis, Jean-Baptiste, Morales, Timothée, Velly, Lionel, Bruder, Nicolas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719000/
https://www.ncbi.nlm.nih.gov/pubmed/34998220
http://dx.doi.org/10.1016/j.compbiomed.2021.105192
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author Boussen, Salah
Cordier, Pierre-Yves
Malet, Arthur
Simeone, Pierre
Cataldi, Sophie
Vaisse, Camille
Roche, Xavier
Castelli, Alexandre
Assal, Mehdi
Pepin, Guillaume
Cot, Kevin
Denis, Jean-Baptiste
Morales, Timothée
Velly, Lionel
Bruder, Nicolas
author_facet Boussen, Salah
Cordier, Pierre-Yves
Malet, Arthur
Simeone, Pierre
Cataldi, Sophie
Vaisse, Camille
Roche, Xavier
Castelli, Alexandre
Assal, Mehdi
Pepin, Guillaume
Cot, Kevin
Denis, Jean-Baptiste
Morales, Timothée
Velly, Lionel
Bruder, Nicolas
author_sort Boussen, Salah
collection PubMed
description BACKGROUND: We designed an algorithm to assess COVID-19 patients severity and dynamic intubation needs and predict their length of stay using the breathing frequency (BF) and oxygen saturation (SpO(2)) signals. METHODS: We recorded the BF and SpO(2) signals for confirmed COVID-19 patients admitted to the ICU of a teaching hospital during both the first and subsequent outbreaks of the pandemic in France. An unsupervised machine-learning algorithm (the Gaussian mixture model) was applied to the patients' data for clustering. The algorithm's robustness was ensured by comparing its results against actual intubation rates. We predicted intubation rates using the algorithm every hour, thus conducting a severity evaluation. We designed a S(24) severity score that represented the patient's severity over the previous 24 h; the validity of MS(24), the maximum S(24) score, was checked against rates of intubation risk and prolonged ICU stay. RESULTS: Our sample included 279 patients. . The unsupervised clustering had an accuracy rate of 87.8% for intubation recognition (AUC = 0.94, True Positive Rate 86.5%, true Negative Rate 90.9%). The S(24) score of intubated patients was significantly higher than that of non-intubated patients at 48 h before intubation. The MS(24) score allowed for the distinguishing between three severity levels with an increased risk of intubation: green (3.4%), orange (37%), and red (77%). A MS(24) score over 40 was highly predictive of an ICU stay greater than 5 days at an accuracy rate of 81.0% (AUC = 0.87). CONCLUSIONS: Our algorithm uses simple signals and seems to efficiently visualize the patients' respiratory situations, meaning that it has the potential to assist staffs' in decision-making. Additionally, real-time computation is easy to implement.
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spelling pubmed-87190002022-01-03 Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning() Boussen, Salah Cordier, Pierre-Yves Malet, Arthur Simeone, Pierre Cataldi, Sophie Vaisse, Camille Roche, Xavier Castelli, Alexandre Assal, Mehdi Pepin, Guillaume Cot, Kevin Denis, Jean-Baptiste Morales, Timothée Velly, Lionel Bruder, Nicolas Comput Biol Med Article BACKGROUND: We designed an algorithm to assess COVID-19 patients severity and dynamic intubation needs and predict their length of stay using the breathing frequency (BF) and oxygen saturation (SpO(2)) signals. METHODS: We recorded the BF and SpO(2) signals for confirmed COVID-19 patients admitted to the ICU of a teaching hospital during both the first and subsequent outbreaks of the pandemic in France. An unsupervised machine-learning algorithm (the Gaussian mixture model) was applied to the patients' data for clustering. The algorithm's robustness was ensured by comparing its results against actual intubation rates. We predicted intubation rates using the algorithm every hour, thus conducting a severity evaluation. We designed a S(24) severity score that represented the patient's severity over the previous 24 h; the validity of MS(24), the maximum S(24) score, was checked against rates of intubation risk and prolonged ICU stay. RESULTS: Our sample included 279 patients. . The unsupervised clustering had an accuracy rate of 87.8% for intubation recognition (AUC = 0.94, True Positive Rate 86.5%, true Negative Rate 90.9%). The S(24) score of intubated patients was significantly higher than that of non-intubated patients at 48 h before intubation. The MS(24) score allowed for the distinguishing between three severity levels with an increased risk of intubation: green (3.4%), orange (37%), and red (77%). A MS(24) score over 40 was highly predictive of an ICU stay greater than 5 days at an accuracy rate of 81.0% (AUC = 0.87). CONCLUSIONS: Our algorithm uses simple signals and seems to efficiently visualize the patients' respiratory situations, meaning that it has the potential to assist staffs' in decision-making. Additionally, real-time computation is easy to implement. Elsevier Ltd. 2022-03 2021-12-31 /pmc/articles/PMC8719000/ /pubmed/34998220 http://dx.doi.org/10.1016/j.compbiomed.2021.105192 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Boussen, Salah
Cordier, Pierre-Yves
Malet, Arthur
Simeone, Pierre
Cataldi, Sophie
Vaisse, Camille
Roche, Xavier
Castelli, Alexandre
Assal, Mehdi
Pepin, Guillaume
Cot, Kevin
Denis, Jean-Baptiste
Morales, Timothée
Velly, Lionel
Bruder, Nicolas
Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()
title Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()
title_full Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()
title_fullStr Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()
title_full_unstemmed Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()
title_short Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning()
title_sort triage and monitoring of covid-19 patients in intensive care using unsupervised machine learning()
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719000/
https://www.ncbi.nlm.nih.gov/pubmed/34998220
http://dx.doi.org/10.1016/j.compbiomed.2021.105192
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