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The evolution of knowledge on genes associated with human diseases
Thousands of biomedical scientific articles, including those describing genes associated with human diseases, are published every week. Computational methods such as text mining and machine learning algorithms are now able to automatically detect these associations. In this study, we used a cognitiv...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719018/ https://www.ncbi.nlm.nih.gov/pubmed/35005554 http://dx.doi.org/10.1016/j.isci.2021.103610 |
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author | Lüscher-Dias, Thomaz Siqueira Dalmolin, Rodrigo Juliani de Paiva Amaral, Paulo Alves, Tiago Lubiana Schuch, Viviane Franco, Glória Regina Nakaya, Helder I. |
author_facet | Lüscher-Dias, Thomaz Siqueira Dalmolin, Rodrigo Juliani de Paiva Amaral, Paulo Alves, Tiago Lubiana Schuch, Viviane Franco, Glória Regina Nakaya, Helder I. |
author_sort | Lüscher-Dias, Thomaz |
collection | PubMed |
description | Thousands of biomedical scientific articles, including those describing genes associated with human diseases, are published every week. Computational methods such as text mining and machine learning algorithms are now able to automatically detect these associations. In this study, we used a cognitive computing text-mining application to construct a knowledge network comprising 3,723 genes and 99 diseases. We then tracked the yearly changes on these networks to analyze how our knowledge has evolved in the past 30 years. Our systems approach helped to unravel the molecular bases of diseases and detect shared mechanisms between clinically distinct diseases. It also revealed that multi-purpose therapeutic drugs target genes that are commonly associated with several psychiatric, inflammatory, or infectious disorders. By navigating this knowledge tsunami, we were able to extract relevant biological information and insights about human diseases. |
format | Online Article Text |
id | pubmed-8719018 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-87190182022-01-07 The evolution of knowledge on genes associated with human diseases Lüscher-Dias, Thomaz Siqueira Dalmolin, Rodrigo Juliani de Paiva Amaral, Paulo Alves, Tiago Lubiana Schuch, Viviane Franco, Glória Regina Nakaya, Helder I. iScience Article Thousands of biomedical scientific articles, including those describing genes associated with human diseases, are published every week. Computational methods such as text mining and machine learning algorithms are now able to automatically detect these associations. In this study, we used a cognitive computing text-mining application to construct a knowledge network comprising 3,723 genes and 99 diseases. We then tracked the yearly changes on these networks to analyze how our knowledge has evolved in the past 30 years. Our systems approach helped to unravel the molecular bases of diseases and detect shared mechanisms between clinically distinct diseases. It also revealed that multi-purpose therapeutic drugs target genes that are commonly associated with several psychiatric, inflammatory, or infectious disorders. By navigating this knowledge tsunami, we were able to extract relevant biological information and insights about human diseases. Elsevier 2021-12-11 /pmc/articles/PMC8719018/ /pubmed/35005554 http://dx.doi.org/10.1016/j.isci.2021.103610 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Lüscher-Dias, Thomaz Siqueira Dalmolin, Rodrigo Juliani de Paiva Amaral, Paulo Alves, Tiago Lubiana Schuch, Viviane Franco, Glória Regina Nakaya, Helder I. The evolution of knowledge on genes associated with human diseases |
title | The evolution of knowledge on genes associated with human diseases |
title_full | The evolution of knowledge on genes associated with human diseases |
title_fullStr | The evolution of knowledge on genes associated with human diseases |
title_full_unstemmed | The evolution of knowledge on genes associated with human diseases |
title_short | The evolution of knowledge on genes associated with human diseases |
title_sort | evolution of knowledge on genes associated with human diseases |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719018/ https://www.ncbi.nlm.nih.gov/pubmed/35005554 http://dx.doi.org/10.1016/j.isci.2021.103610 |
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