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The evolution of knowledge on genes associated with human diseases

Thousands of biomedical scientific articles, including those describing genes associated with human diseases, are published every week. Computational methods such as text mining and machine learning algorithms are now able to automatically detect these associations. In this study, we used a cognitiv...

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Detalles Bibliográficos
Autores principales: Lüscher-Dias, Thomaz, Siqueira Dalmolin, Rodrigo Juliani, de Paiva Amaral, Paulo, Alves, Tiago Lubiana, Schuch, Viviane, Franco, Glória Regina, Nakaya, Helder I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719018/
https://www.ncbi.nlm.nih.gov/pubmed/35005554
http://dx.doi.org/10.1016/j.isci.2021.103610
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author Lüscher-Dias, Thomaz
Siqueira Dalmolin, Rodrigo Juliani
de Paiva Amaral, Paulo
Alves, Tiago Lubiana
Schuch, Viviane
Franco, Glória Regina
Nakaya, Helder I.
author_facet Lüscher-Dias, Thomaz
Siqueira Dalmolin, Rodrigo Juliani
de Paiva Amaral, Paulo
Alves, Tiago Lubiana
Schuch, Viviane
Franco, Glória Regina
Nakaya, Helder I.
author_sort Lüscher-Dias, Thomaz
collection PubMed
description Thousands of biomedical scientific articles, including those describing genes associated with human diseases, are published every week. Computational methods such as text mining and machine learning algorithms are now able to automatically detect these associations. In this study, we used a cognitive computing text-mining application to construct a knowledge network comprising 3,723 genes and 99 diseases. We then tracked the yearly changes on these networks to analyze how our knowledge has evolved in the past 30 years. Our systems approach helped to unravel the molecular bases of diseases and detect shared mechanisms between clinically distinct diseases. It also revealed that multi-purpose therapeutic drugs target genes that are commonly associated with several psychiatric, inflammatory, or infectious disorders. By navigating this knowledge tsunami, we were able to extract relevant biological information and insights about human diseases.
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spelling pubmed-87190182022-01-07 The evolution of knowledge on genes associated with human diseases Lüscher-Dias, Thomaz Siqueira Dalmolin, Rodrigo Juliani de Paiva Amaral, Paulo Alves, Tiago Lubiana Schuch, Viviane Franco, Glória Regina Nakaya, Helder I. iScience Article Thousands of biomedical scientific articles, including those describing genes associated with human diseases, are published every week. Computational methods such as text mining and machine learning algorithms are now able to automatically detect these associations. In this study, we used a cognitive computing text-mining application to construct a knowledge network comprising 3,723 genes and 99 diseases. We then tracked the yearly changes on these networks to analyze how our knowledge has evolved in the past 30 years. Our systems approach helped to unravel the molecular bases of diseases and detect shared mechanisms between clinically distinct diseases. It also revealed that multi-purpose therapeutic drugs target genes that are commonly associated with several psychiatric, inflammatory, or infectious disorders. By navigating this knowledge tsunami, we were able to extract relevant biological information and insights about human diseases. Elsevier 2021-12-11 /pmc/articles/PMC8719018/ /pubmed/35005554 http://dx.doi.org/10.1016/j.isci.2021.103610 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Lüscher-Dias, Thomaz
Siqueira Dalmolin, Rodrigo Juliani
de Paiva Amaral, Paulo
Alves, Tiago Lubiana
Schuch, Viviane
Franco, Glória Regina
Nakaya, Helder I.
The evolution of knowledge on genes associated with human diseases
title The evolution of knowledge on genes associated with human diseases
title_full The evolution of knowledge on genes associated with human diseases
title_fullStr The evolution of knowledge on genes associated with human diseases
title_full_unstemmed The evolution of knowledge on genes associated with human diseases
title_short The evolution of knowledge on genes associated with human diseases
title_sort evolution of knowledge on genes associated with human diseases
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719018/
https://www.ncbi.nlm.nih.gov/pubmed/35005554
http://dx.doi.org/10.1016/j.isci.2021.103610
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