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Novel transaminases from thermophiles: from discovery to application

Transaminases (TAs) are promising biocatalysts for chiral amine synthesis; however, only few thermophilic TAs have been described to date. In this work, a genome mining approach was taken to seek novel TAs from nine thermophilic microorganisms. TA sequences were identified from their respective geno...

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Detalles Bibliográficos
Autores principales: Cárdenas‐Fernández, Max, Sinclair, Oliver, Ward, John M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719814/
https://www.ncbi.nlm.nih.gov/pubmed/34713952
http://dx.doi.org/10.1111/1751-7915.13940
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author Cárdenas‐Fernández, Max
Sinclair, Oliver
Ward, John M.
author_facet Cárdenas‐Fernández, Max
Sinclair, Oliver
Ward, John M.
author_sort Cárdenas‐Fernández, Max
collection PubMed
description Transaminases (TAs) are promising biocatalysts for chiral amine synthesis; however, only few thermophilic TAs have been described to date. In this work, a genome mining approach was taken to seek novel TAs from nine thermophilic microorganisms. TA sequences were identified from their respective genome sequences and their Pfam were predicted confirming that TAs class I–II are the most abundant (50%), followed by class III (26%), V (16%), IV (8%) and VI (1%). The percentage of open reading frames (ORFs) that are TAs ranges from 0.689% in Thermococcus litoralis to 0.424% in Sulfolobus solfataricus. A total of 94 putative TAs were successfully cloned and expressed into E. coli, showing mostly good expression levels when using a chemical chaperone media containing d‐sorbitol. Kinetic and end‐point colorimetric assays with different amino donors–acceptors confirmed TAs activity allowing for initial exploration of the substrate scope. Stereoselective and non‐stereoselective serine‐TAs were selected for the synthesis of hydroxypyruvate (HPA). Low HPA reaction yields were observed with four non‐stereoselective serine‐TAs, whilst two stereoselective serine‐TAs showed significantly higher yields. Coupling serine‐TA reactions to a transketolase to yield l‐erythrulose (Ery) substantially increased serine conversion into HPA. Combining both stereoselective serine‐TAs and transketolase using the inexpensive racemic D/L‐serine led to high Ery yield (82%). Thermal characterization of stereoselective serine‐TAs confirmed they have excellent thermostability up to 60°C and high optimum temperatures.
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spelling pubmed-87198142022-01-07 Novel transaminases from thermophiles: from discovery to application Cárdenas‐Fernández, Max Sinclair, Oliver Ward, John M. Microb Biotechnol Research Articles Transaminases (TAs) are promising biocatalysts for chiral amine synthesis; however, only few thermophilic TAs have been described to date. In this work, a genome mining approach was taken to seek novel TAs from nine thermophilic microorganisms. TA sequences were identified from their respective genome sequences and their Pfam were predicted confirming that TAs class I–II are the most abundant (50%), followed by class III (26%), V (16%), IV (8%) and VI (1%). The percentage of open reading frames (ORFs) that are TAs ranges from 0.689% in Thermococcus litoralis to 0.424% in Sulfolobus solfataricus. A total of 94 putative TAs were successfully cloned and expressed into E. coli, showing mostly good expression levels when using a chemical chaperone media containing d‐sorbitol. Kinetic and end‐point colorimetric assays with different amino donors–acceptors confirmed TAs activity allowing for initial exploration of the substrate scope. Stereoselective and non‐stereoselective serine‐TAs were selected for the synthesis of hydroxypyruvate (HPA). Low HPA reaction yields were observed with four non‐stereoselective serine‐TAs, whilst two stereoselective serine‐TAs showed significantly higher yields. Coupling serine‐TA reactions to a transketolase to yield l‐erythrulose (Ery) substantially increased serine conversion into HPA. Combining both stereoselective serine‐TAs and transketolase using the inexpensive racemic D/L‐serine led to high Ery yield (82%). Thermal characterization of stereoselective serine‐TAs confirmed they have excellent thermostability up to 60°C and high optimum temperatures. John Wiley and Sons Inc. 2021-10-29 /pmc/articles/PMC8719814/ /pubmed/34713952 http://dx.doi.org/10.1111/1751-7915.13940 Text en © 2021 The Authors. Microbial Biotechnology published by Society for Applied Microbiology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Cárdenas‐Fernández, Max
Sinclair, Oliver
Ward, John M.
Novel transaminases from thermophiles: from discovery to application
title Novel transaminases from thermophiles: from discovery to application
title_full Novel transaminases from thermophiles: from discovery to application
title_fullStr Novel transaminases from thermophiles: from discovery to application
title_full_unstemmed Novel transaminases from thermophiles: from discovery to application
title_short Novel transaminases from thermophiles: from discovery to application
title_sort novel transaminases from thermophiles: from discovery to application
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8719814/
https://www.ncbi.nlm.nih.gov/pubmed/34713952
http://dx.doi.org/10.1111/1751-7915.13940
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