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Bayesian validation framework for dynamic epidemic models

Complex models of infectious diseases are used to understand the transmission dynamics of the disease, project the course of an epidemic, predict the effect of interventions and/or provide information for power calculations of community level intervention studies. However, there have been relatively...

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Detalles Bibliográficos
Autores principales: Dasgupta, Sayan, Moore, Mia R., Dimitrov, Dobromir T., Hughes, James P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8720263/
https://www.ncbi.nlm.nih.gov/pubmed/34763161
http://dx.doi.org/10.1016/j.epidem.2021.100514
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author Dasgupta, Sayan
Moore, Mia R.
Dimitrov, Dobromir T.
Hughes, James P.
author_facet Dasgupta, Sayan
Moore, Mia R.
Dimitrov, Dobromir T.
Hughes, James P.
author_sort Dasgupta, Sayan
collection PubMed
description Complex models of infectious diseases are used to understand the transmission dynamics of the disease, project the course of an epidemic, predict the effect of interventions and/or provide information for power calculations of community level intervention studies. However, there have been relatively few opportunities to rigorously evaluate the predictions of such models till now. Indeed, while there is a large literature on calibration (fitting model parameters) and validation (comparing model outputs to data) of complex models based on empirical data, the lack of uniformity in accepted criteria for such procedures for models of infectious diseases has led to simple procedures being prevalent for such steps. However, recently, several community level randomized trials of combination HIV intervention have been planned and/or initiated, and in each case, significant epidemic modeling efforts were conducted during trial planning which were integral to the design of these trials. The existence of these models and the (anticipated) availability of results from the related trials, provide a unique opportunity to evaluate the models and their usefulness in trial design. In this project, we outline a framework for evaluating the predictions of complex epidemiological models and describe experiments that can be used to test their predictions.
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spelling pubmed-87202632022-01-01 Bayesian validation framework for dynamic epidemic models Dasgupta, Sayan Moore, Mia R. Dimitrov, Dobromir T. Hughes, James P. Epidemics Article Complex models of infectious diseases are used to understand the transmission dynamics of the disease, project the course of an epidemic, predict the effect of interventions and/or provide information for power calculations of community level intervention studies. However, there have been relatively few opportunities to rigorously evaluate the predictions of such models till now. Indeed, while there is a large literature on calibration (fitting model parameters) and validation (comparing model outputs to data) of complex models based on empirical data, the lack of uniformity in accepted criteria for such procedures for models of infectious diseases has led to simple procedures being prevalent for such steps. However, recently, several community level randomized trials of combination HIV intervention have been planned and/or initiated, and in each case, significant epidemic modeling efforts were conducted during trial planning which were integral to the design of these trials. The existence of these models and the (anticipated) availability of results from the related trials, provide a unique opportunity to evaluate the models and their usefulness in trial design. In this project, we outline a framework for evaluating the predictions of complex epidemiological models and describe experiments that can be used to test their predictions. 2021-10-30 2021-12 /pmc/articles/PMC8720263/ /pubmed/34763161 http://dx.doi.org/10.1016/j.epidem.2021.100514 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Dasgupta, Sayan
Moore, Mia R.
Dimitrov, Dobromir T.
Hughes, James P.
Bayesian validation framework for dynamic epidemic models
title Bayesian validation framework for dynamic epidemic models
title_full Bayesian validation framework for dynamic epidemic models
title_fullStr Bayesian validation framework for dynamic epidemic models
title_full_unstemmed Bayesian validation framework for dynamic epidemic models
title_short Bayesian validation framework for dynamic epidemic models
title_sort bayesian validation framework for dynamic epidemic models
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8720263/
https://www.ncbi.nlm.nih.gov/pubmed/34763161
http://dx.doi.org/10.1016/j.epidem.2021.100514
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