Cargando…

Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells

Granulosa cells (GCs) are decisive players in follicular development. In this study, the follicle tissues and GCs were isolated from the goose during the peak-laying period to perform hematoxylin-eosin staining and RNA-seq, respectively. Moreover, the dynamic mRNA and lncRNA expression profiles and...

Descripción completa

Detalles Bibliográficos
Autores principales: Gao, Guangliang, Hu, Silu, Zhang, Keshan, Wang, Haiwei, Xie, Youhui, Zhang, Changlian, Wu, Rui, Zhao, Xianzhi, Zhang, Hongmei, Wang, Qigui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725158/
https://www.ncbi.nlm.nih.gov/pubmed/34992633
http://dx.doi.org/10.3389/fgene.2021.786287
_version_ 1784626059533090816
author Gao, Guangliang
Hu, Silu
Zhang, Keshan
Wang, Haiwei
Xie, Youhui
Zhang, Changlian
Wu, Rui
Zhao, Xianzhi
Zhang, Hongmei
Wang, Qigui
author_facet Gao, Guangliang
Hu, Silu
Zhang, Keshan
Wang, Haiwei
Xie, Youhui
Zhang, Changlian
Wu, Rui
Zhao, Xianzhi
Zhang, Hongmei
Wang, Qigui
author_sort Gao, Guangliang
collection PubMed
description Granulosa cells (GCs) are decisive players in follicular development. In this study, the follicle tissues and GCs were isolated from the goose during the peak-laying period to perform hematoxylin-eosin staining and RNA-seq, respectively. Moreover, the dynamic mRNA and lncRNA expression profiles and mRNA-lncRNA network analysis were integrated to identify the important genes and lncRNAs. The morphological analysis showed that the size of the GCs did not significantly change, but the thickness of the granulosa layer cells differed significantly across the developmental stages. Subsequently, 14,286 mRNAs, 3,956 lncRNAs, and 1,329 TUCPs (transcripts with unknown coding potential) were detected in the GCs. We identified 37 common DEGs in the pre-hierarchical and hierarchical follicle stages, respectively, which might be critical for follicle development. Moreover, 3,089 significant time-course DEGs (Differentially expressed genes) and 13 core genes in 4 clusters were screened during goose GCs development. Finally, the network lncRNA G8399 with CADH5 and KLF2, and lncRNA G8399 with LARP6 and EOMES were found to be important for follicular development in GCs. Thus, the results would provide a rich resource for elucidating the reproductive biology of geese and accelerate the improvement of the egg-laying performance of geese.
format Online
Article
Text
id pubmed-8725158
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-87251582022-01-05 Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells Gao, Guangliang Hu, Silu Zhang, Keshan Wang, Haiwei Xie, Youhui Zhang, Changlian Wu, Rui Zhao, Xianzhi Zhang, Hongmei Wang, Qigui Front Genet Genetics Granulosa cells (GCs) are decisive players in follicular development. In this study, the follicle tissues and GCs were isolated from the goose during the peak-laying period to perform hematoxylin-eosin staining and RNA-seq, respectively. Moreover, the dynamic mRNA and lncRNA expression profiles and mRNA-lncRNA network analysis were integrated to identify the important genes and lncRNAs. The morphological analysis showed that the size of the GCs did not significantly change, but the thickness of the granulosa layer cells differed significantly across the developmental stages. Subsequently, 14,286 mRNAs, 3,956 lncRNAs, and 1,329 TUCPs (transcripts with unknown coding potential) were detected in the GCs. We identified 37 common DEGs in the pre-hierarchical and hierarchical follicle stages, respectively, which might be critical for follicle development. Moreover, 3,089 significant time-course DEGs (Differentially expressed genes) and 13 core genes in 4 clusters were screened during goose GCs development. Finally, the network lncRNA G8399 with CADH5 and KLF2, and lncRNA G8399 with LARP6 and EOMES were found to be important for follicular development in GCs. Thus, the results would provide a rich resource for elucidating the reproductive biology of geese and accelerate the improvement of the egg-laying performance of geese. Frontiers Media S.A. 2021-12-17 /pmc/articles/PMC8725158/ /pubmed/34992633 http://dx.doi.org/10.3389/fgene.2021.786287 Text en Copyright © 2021 Gao, Hu, Zhang, Wang, Xie, Zhang, Wu, Zhao, Zhang and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Gao, Guangliang
Hu, Silu
Zhang, Keshan
Wang, Haiwei
Xie, Youhui
Zhang, Changlian
Wu, Rui
Zhao, Xianzhi
Zhang, Hongmei
Wang, Qigui
Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells
title Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells
title_full Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells
title_fullStr Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells
title_full_unstemmed Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells
title_short Genome-Wide Gene Expression Profiles Reveal Distinct Molecular Characteristics of the Goose Granulosa Cells
title_sort genome-wide gene expression profiles reveal distinct molecular characteristics of the goose granulosa cells
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725158/
https://www.ncbi.nlm.nih.gov/pubmed/34992633
http://dx.doi.org/10.3389/fgene.2021.786287
work_keys_str_mv AT gaoguangliang genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT husilu genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT zhangkeshan genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT wanghaiwei genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT xieyouhui genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT zhangchanglian genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT wurui genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT zhaoxianzhi genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT zhanghongmei genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells
AT wangqigui genomewidegeneexpressionprofilesrevealdistinctmolecularcharacteristicsofthegoosegranulosacells