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Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions
Here we present a method to extract thermodynamic quantities for nanoparticle dispersions in solvents. The method is based on the study of tomograms obtained from cryogenic electron tomography (cryoET). The approach is demonstrated for gold nanoparticles (diameter < 5 nm). Tomograms are reconstru...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725794/ https://www.ncbi.nlm.nih.gov/pubmed/34739025 http://dx.doi.org/10.1039/d1mh01461g |
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author | Ong, Quy Mao, Ting Iranpour Anaraki, Neda Richter, Łukasz Malinverni, Carla Xu, Xufeng Olgiati, Francesca Silva, Paulo Henrique Jacob Murello, Anna Neels, Antonia Demurtas, Davide Shimizu, Seishi Stellacci, Francesco |
author_facet | Ong, Quy Mao, Ting Iranpour Anaraki, Neda Richter, Łukasz Malinverni, Carla Xu, Xufeng Olgiati, Francesca Silva, Paulo Henrique Jacob Murello, Anna Neels, Antonia Demurtas, Davide Shimizu, Seishi Stellacci, Francesco |
author_sort | Ong, Quy |
collection | PubMed |
description | Here we present a method to extract thermodynamic quantities for nanoparticle dispersions in solvents. The method is based on the study of tomograms obtained from cryogenic electron tomography (cryoET). The approach is demonstrated for gold nanoparticles (diameter < 5 nm). Tomograms are reconstructed from tilt-series 2D images. Once the three-dimensional (3D) coordinates for the centres of mass of all of the particles in the sample are determined, we calculate the pair distribution function g(r) and the potential of mean force U(r) without any assumption. Importantly, we show that further quantitative information from 3D tomograms is readily available as the spatial fluctuation in the particles’ position can be efficiently determined. This in turn allows for the prompt derivation of the Kirkwood–Buff integrals with all their associated quantities such as the second virial coefficient. Finally, the structure factor and the agglomeration states of the particles are evaluated directly. These thermodynamic quantities provide key insights into the dispersion properties of the particles. The method works well both for dispersed systems containing isolated particles and for systems with varying degrees of agglomerations. |
format | Online Article Text |
id | pubmed-8725794 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-87257942022-02-04 Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions Ong, Quy Mao, Ting Iranpour Anaraki, Neda Richter, Łukasz Malinverni, Carla Xu, Xufeng Olgiati, Francesca Silva, Paulo Henrique Jacob Murello, Anna Neels, Antonia Demurtas, Davide Shimizu, Seishi Stellacci, Francesco Mater Horiz Chemistry Here we present a method to extract thermodynamic quantities for nanoparticle dispersions in solvents. The method is based on the study of tomograms obtained from cryogenic electron tomography (cryoET). The approach is demonstrated for gold nanoparticles (diameter < 5 nm). Tomograms are reconstructed from tilt-series 2D images. Once the three-dimensional (3D) coordinates for the centres of mass of all of the particles in the sample are determined, we calculate the pair distribution function g(r) and the potential of mean force U(r) without any assumption. Importantly, we show that further quantitative information from 3D tomograms is readily available as the spatial fluctuation in the particles’ position can be efficiently determined. This in turn allows for the prompt derivation of the Kirkwood–Buff integrals with all their associated quantities such as the second virial coefficient. Finally, the structure factor and the agglomeration states of the particles are evaluated directly. These thermodynamic quantities provide key insights into the dispersion properties of the particles. The method works well both for dispersed systems containing isolated particles and for systems with varying degrees of agglomerations. The Royal Society of Chemistry 2021-11-05 /pmc/articles/PMC8725794/ /pubmed/34739025 http://dx.doi.org/10.1039/d1mh01461g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Ong, Quy Mao, Ting Iranpour Anaraki, Neda Richter, Łukasz Malinverni, Carla Xu, Xufeng Olgiati, Francesca Silva, Paulo Henrique Jacob Murello, Anna Neels, Antonia Demurtas, Davide Shimizu, Seishi Stellacci, Francesco Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
title | Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
title_full | Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
title_fullStr | Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
title_full_unstemmed | Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
title_short | Cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
title_sort | cryogenic electron tomography to determine thermodynamic quantities for nanoparticle dispersions |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725794/ https://www.ncbi.nlm.nih.gov/pubmed/34739025 http://dx.doi.org/10.1039/d1mh01461g |
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