The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis

Aconitum piepunense belonging to the family Ranunculaceae is an endangered herb species in southwestern China. In this study, the complete chloroplast genome of A. piepunense was sequenced, and the results revealed a typical quadripartite structure with a length of 155,836 bp, including a large sing...

Descripción completa

Detalles Bibliográficos
Autores principales: Ni, Xueshan, Li, Jian, Li, Yunfei, Zhang, Haizhu, Duan, Baozhong, Chen, Xubing, Xia, Conglong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725895/
https://www.ncbi.nlm.nih.gov/pubmed/34993331
http://dx.doi.org/10.1080/23802359.2021.2011448
_version_ 1784626209594802176
author Ni, Xueshan
Li, Jian
Li, Yunfei
Zhang, Haizhu
Duan, Baozhong
Chen, Xubing
Xia, Conglong
author_facet Ni, Xueshan
Li, Jian
Li, Yunfei
Zhang, Haizhu
Duan, Baozhong
Chen, Xubing
Xia, Conglong
author_sort Ni, Xueshan
collection PubMed
description Aconitum piepunense belonging to the family Ranunculaceae is an endangered herb species in southwestern China. In this study, the complete chloroplast genome of A. piepunense was sequenced, and the results revealed a typical quadripartite structure with a length of 155,836 bp, including a large single-copy region (LSC, 86,433 bp), a small single-copy region (SSC, 16,945 bp), and a pair of inverted repeat (IR) regions (IRa and IRb, 26,229 bp, respectively). A total of 130 genes were identified in the A. piepunense chloroplast genome, containing 85 protein-coding genes, 37 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Phylogenetic analysis based on the maximum likelihood method indicated that A. piepunense formed a monophyletic group, which was sister to A. contortum and A. vilmorinianum.
format Online
Article
Text
id pubmed-8725895
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-87258952022-01-05 The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis Ni, Xueshan Li, Jian Li, Yunfei Zhang, Haizhu Duan, Baozhong Chen, Xubing Xia, Conglong Mitochondrial DNA B Resour Mitogenome Announcement Aconitum piepunense belonging to the family Ranunculaceae is an endangered herb species in southwestern China. In this study, the complete chloroplast genome of A. piepunense was sequenced, and the results revealed a typical quadripartite structure with a length of 155,836 bp, including a large single-copy region (LSC, 86,433 bp), a small single-copy region (SSC, 16,945 bp), and a pair of inverted repeat (IR) regions (IRa and IRb, 26,229 bp, respectively). A total of 130 genes were identified in the A. piepunense chloroplast genome, containing 85 protein-coding genes, 37 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Phylogenetic analysis based on the maximum likelihood method indicated that A. piepunense formed a monophyletic group, which was sister to A. contortum and A. vilmorinianum. Taylor & Francis 2021-12-28 /pmc/articles/PMC8725895/ /pubmed/34993331 http://dx.doi.org/10.1080/23802359.2021.2011448 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ni, Xueshan
Li, Jian
Li, Yunfei
Zhang, Haizhu
Duan, Baozhong
Chen, Xubing
Xia, Conglong
The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis
title The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis
title_full The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis
title_fullStr The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis
title_full_unstemmed The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis
title_short The complete chloroplast genome of Aconitum piepunense (Ranunculaceae) and its phylogenetic analysis
title_sort complete chloroplast genome of aconitum piepunense (ranunculaceae) and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725895/
https://www.ncbi.nlm.nih.gov/pubmed/34993331
http://dx.doi.org/10.1080/23802359.2021.2011448
work_keys_str_mv AT nixueshan thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT lijian thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT liyunfei thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT zhanghaizhu thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT duanbaozhong thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT chenxubing thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT xiaconglong thecompletechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT nixueshan completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT lijian completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT liyunfei completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT zhanghaizhu completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT duanbaozhong completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT chenxubing completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis
AT xiaconglong completechloroplastgenomeofaconitumpiepunenseranunculaceaeanditsphylogeneticanalysis

Ejemplares similares