Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill

In this study, the chloroplast genome (Cp) of Clausena anisum-olens ((Blanco) Merrill) was sequenced by high-throughput sequencing technology. We found that the length of the chloroplast genome of Clausena anisum-olens was 159,753 bp, and the total GC content was 38.7%, including a large single-copy...

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Autores principales: Li, Jin-jin, Liu, Chang, Wang, Dan, Guo, Dong-qin, Du, Hui-hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725899/
https://www.ncbi.nlm.nih.gov/pubmed/34993321
http://dx.doi.org/10.1080/23802359.2021.2009386
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author Li, Jin-jin
Liu, Chang
Wang, Dan
Guo, Dong-qin
Du, Hui-hui
author_facet Li, Jin-jin
Liu, Chang
Wang, Dan
Guo, Dong-qin
Du, Hui-hui
author_sort Li, Jin-jin
collection PubMed
description In this study, the chloroplast genome (Cp) of Clausena anisum-olens ((Blanco) Merrill) was sequenced by high-throughput sequencing technology. We found that the length of the chloroplast genome of Clausena anisum-olens was 159,753 bp, and the total GC content was 38.7%, including a large single-copy (LSC) region of 87,623 bp, a small single-copy (SSC) region of 17,986 bp, and 27,072 bp pairs of reverse repeats (IRS). The Cp genome encoded 129 genes, containing 86 protein-coding, 37 tRNA, and 6 rRNA genes. Phylogenetic analysis of the genome sequence showed that Clausena anisum-olens was closely related to Micromelum minutum and Glycosmis mauritiana.
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spelling pubmed-87258992022-01-05 Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill Li, Jin-jin Liu, Chang Wang, Dan Guo, Dong-qin Du, Hui-hui Mitochondrial DNA B Resour MitoGenome Announcement In this study, the chloroplast genome (Cp) of Clausena anisum-olens ((Blanco) Merrill) was sequenced by high-throughput sequencing technology. We found that the length of the chloroplast genome of Clausena anisum-olens was 159,753 bp, and the total GC content was 38.7%, including a large single-copy (LSC) region of 87,623 bp, a small single-copy (SSC) region of 17,986 bp, and 27,072 bp pairs of reverse repeats (IRS). The Cp genome encoded 129 genes, containing 86 protein-coding, 37 tRNA, and 6 rRNA genes. Phylogenetic analysis of the genome sequence showed that Clausena anisum-olens was closely related to Micromelum minutum and Glycosmis mauritiana. Taylor & Francis 2021-12-20 /pmc/articles/PMC8725899/ /pubmed/34993321 http://dx.doi.org/10.1080/23802359.2021.2009386 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Li, Jin-jin
Liu, Chang
Wang, Dan
Guo, Dong-qin
Du, Hui-hui
Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill
title Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill
title_full Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill
title_fullStr Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill
title_full_unstemmed Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill
title_short Characterization and analysis of complete chloroplast genome of Clausena anisum-olens (Blanco) Merrill
title_sort characterization and analysis of complete chloroplast genome of clausena anisum-olens (blanco) merrill
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725899/
https://www.ncbi.nlm.nih.gov/pubmed/34993321
http://dx.doi.org/10.1080/23802359.2021.2009386
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