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Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae)
Leucomeris decora is a traditional medicinal plant that is listed as an endangered species in China. Recently, L. decora has become locally rare. Here the complete chloroplast genome of L. decora was assembled and reported for the first time. Its plastome was 151,491 bp in length, including a large...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725922/ https://www.ncbi.nlm.nih.gov/pubmed/34993315 http://dx.doi.org/10.1080/23802359.2021.2008826 |
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author | Li, Qinghua Yang, Man Lv, Yue Lv, Yaqi Li, Tian Wang, Shilong Ma, Yonggui Shi, Yuhua |
author_facet | Li, Qinghua Yang, Man Lv, Yue Lv, Yaqi Li, Tian Wang, Shilong Ma, Yonggui Shi, Yuhua |
author_sort | Li, Qinghua |
collection | PubMed |
description | Leucomeris decora is a traditional medicinal plant that is listed as an endangered species in China. Recently, L. decora has become locally rare. Here the complete chloroplast genome of L. decora was assembled and reported for the first time. Its plastome was 151,491 bp in length, including a large single-copy region (LSC; 83,155 bp), a small single-copy region (SSC; 18,216 bp), and a pair of inverted repeated regions (IRa and IRb; 25,060 bp). The overall GC content was 37.8%, and the genome contains 134 genes, including 92 protein-coding genes, 8 rRNA genes, and 34 tRNA genes. Phylogenetic analysis of thirteen representative species from the family of Asteraceae showed that L. decora is clustered into one clade with Gerbera jamesonii with high bootstrap values, indicating a close relationship between these two species. |
format | Online Article Text |
id | pubmed-8725922 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-87259222022-01-05 Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) Li, Qinghua Yang, Man Lv, Yue Lv, Yaqi Li, Tian Wang, Shilong Ma, Yonggui Shi, Yuhua Mitochondrial DNA B Resour Mitogenome Announcement Leucomeris decora is a traditional medicinal plant that is listed as an endangered species in China. Recently, L. decora has become locally rare. Here the complete chloroplast genome of L. decora was assembled and reported for the first time. Its plastome was 151,491 bp in length, including a large single-copy region (LSC; 83,155 bp), a small single-copy region (SSC; 18,216 bp), and a pair of inverted repeated regions (IRa and IRb; 25,060 bp). The overall GC content was 37.8%, and the genome contains 134 genes, including 92 protein-coding genes, 8 rRNA genes, and 34 tRNA genes. Phylogenetic analysis of thirteen representative species from the family of Asteraceae showed that L. decora is clustered into one clade with Gerbera jamesonii with high bootstrap values, indicating a close relationship between these two species. Taylor & Francis 2021-12-19 /pmc/articles/PMC8725922/ /pubmed/34993315 http://dx.doi.org/10.1080/23802359.2021.2008826 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Qinghua Yang, Man Lv, Yue Lv, Yaqi Li, Tian Wang, Shilong Ma, Yonggui Shi, Yuhua Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) |
title | Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) |
title_full | Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) |
title_fullStr | Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) |
title_short | Characterization of the complete chloroplast genome of Leucomeris decora Kurz (Asteraceae) |
title_sort | characterization of the complete chloroplast genome of leucomeris decora kurz (asteraceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725922/ https://www.ncbi.nlm.nih.gov/pubmed/34993315 http://dx.doi.org/10.1080/23802359.2021.2008826 |
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