The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)

Vandenboschia striata is a common and widespread filmy fern of Hymenophyllaceae. Its complete chloroplast genome is 147,014 bp in length, including a large single copy (LSC) region of 89,886 bp, a small single copy (SSC) region of 20,850 bp, and a pair of inverted repeats (IRs) of 18,139 bp. Totally...

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Autores principales: Wang, Ruonan, Zhao, Guohua, Wang, Zhen, Lin, Zhongyao, Jiang, Xinyue, Lin, Shengde, Chan, HokYan, Hong, Yongfeng, Zhang, Yuli, Su, Yingjuan, Wang, Ting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725982/
https://www.ncbi.nlm.nih.gov/pubmed/34993335
http://dx.doi.org/10.1080/23802359.2021.2013744
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author Wang, Ruonan
Zhao, Guohua
Wang, Zhen
Lin, Zhongyao
Jiang, Xinyue
Lin, Shengde
Chan, HokYan
Hong, Yongfeng
Zhang, Yuli
Su, Yingjuan
Wang, Ting
author_facet Wang, Ruonan
Zhao, Guohua
Wang, Zhen
Lin, Zhongyao
Jiang, Xinyue
Lin, Shengde
Chan, HokYan
Hong, Yongfeng
Zhang, Yuli
Su, Yingjuan
Wang, Ting
author_sort Wang, Ruonan
collection PubMed
description Vandenboschia striata is a common and widespread filmy fern of Hymenophyllaceae. Its complete chloroplast genome is 147,014 bp in length, including a large single copy (LSC) region of 89,886 bp, a small single copy (SSC) region of 20,850 bp, and a pair of inverted repeats (IRs) of 18,139 bp. Totally, 132 genes are predicted in the cp genome embodies, including 88 protein coding genes, 36 tRNA genes, and eight rRNA genes. A maximum-likelihood tree was constructed to explore phylogenetic relationship. The result showed that V. striata was sister to V.speciosa with 100% bootstrap support. The complete chloroplast genome sequences of V. striata would be beneficial to further phylogenetic survey on classification of the related species or genera in Hymenophyllaceae.
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spelling pubmed-87259822022-01-05 The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae) Wang, Ruonan Zhao, Guohua Wang, Zhen Lin, Zhongyao Jiang, Xinyue Lin, Shengde Chan, HokYan Hong, Yongfeng Zhang, Yuli Su, Yingjuan Wang, Ting Mitochondrial DNA B Resour Mitogenome Announcement Vandenboschia striata is a common and widespread filmy fern of Hymenophyllaceae. Its complete chloroplast genome is 147,014 bp in length, including a large single copy (LSC) region of 89,886 bp, a small single copy (SSC) region of 20,850 bp, and a pair of inverted repeats (IRs) of 18,139 bp. Totally, 132 genes are predicted in the cp genome embodies, including 88 protein coding genes, 36 tRNA genes, and eight rRNA genes. A maximum-likelihood tree was constructed to explore phylogenetic relationship. The result showed that V. striata was sister to V.speciosa with 100% bootstrap support. The complete chloroplast genome sequences of V. striata would be beneficial to further phylogenetic survey on classification of the related species or genera in Hymenophyllaceae. Taylor & Francis 2021-12-29 /pmc/articles/PMC8725982/ /pubmed/34993335 http://dx.doi.org/10.1080/23802359.2021.2013744 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Ruonan
Zhao, Guohua
Wang, Zhen
Lin, Zhongyao
Jiang, Xinyue
Lin, Shengde
Chan, HokYan
Hong, Yongfeng
Zhang, Yuli
Su, Yingjuan
Wang, Ting
The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)
title The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)
title_full The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)
title_fullStr The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)
title_full_unstemmed The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)
title_short The complete chloroplast genome of Vandenboschia striata, a common and widespread filmy fern (Hymenophyllaceae)
title_sort complete chloroplast genome of vandenboschia striata, a common and widespread filmy fern (hymenophyllaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725982/
https://www.ncbi.nlm.nih.gov/pubmed/34993335
http://dx.doi.org/10.1080/23802359.2021.2013744
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