Cargando…

Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma

BACKGROUND: Ferroptosis has exhibited great potential in the treatment of cancer and has gained widespread attention in soft tissue sarcoma (STS). The aim was to explore the immunological and prognostic significance of novel ferroptosis-related genes in STS. METHODS: We identified ferroptosis-relate...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhao, Jiazheng, Zhao, Yi, Ma, Xiaowei, Feng, Helin, Cui, Rongmin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8726495/
https://www.ncbi.nlm.nih.gov/pubmed/34982796
http://dx.doi.org/10.1371/journal.pone.0262234
_version_ 1784626337852424192
author Zhao, Jiazheng
Zhao, Yi
Ma, Xiaowei
Feng, Helin
Cui, Rongmin
author_facet Zhao, Jiazheng
Zhao, Yi
Ma, Xiaowei
Feng, Helin
Cui, Rongmin
author_sort Zhao, Jiazheng
collection PubMed
description BACKGROUND: Ferroptosis has exhibited great potential in the treatment of cancer and has gained widespread attention in soft tissue sarcoma (STS). The aim was to explore the immunological and prognostic significance of novel ferroptosis-related genes in STS. METHODS: We identified ferroptosis-related differentially expressed genes (DEGs) in STS to construct the networks of enrichment analysis and protein-protein interaction. Subsequently, hub genes with prognostic significance were localized and a series of prognostic and immune analyses were performed. RESULTS: 40 ferroptosis-related DEGs were identified, of which HELLS, STMN1 EPAS1, CXCL2, NQO1, and IL6 were classified as hub genes and were associated with the prognosis in STS patients. In the results of the immune analysis, PDCD1, CTLA4, TIGIT, IDO1 and CD27 exhibited consistent intense correlations as immune checkpoint genes, as well as macrophage, neutrophil, cytotoxic cell, dendritic cell, interdigitating dendritic cell and plasmacytoid dendritic cell as immune cells. EPAS1 and HELLS might be independent prognostic factors for STS patients, and separate prognostic models were constructed by using them. CONCLUSIONS: We recognized novel ferroptosis-related genes with prognostic value in STS. Furthermore, we searched out potential immune checkpoints and critical immune cells.
format Online
Article
Text
id pubmed-8726495
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-87264952022-01-05 Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma Zhao, Jiazheng Zhao, Yi Ma, Xiaowei Feng, Helin Cui, Rongmin PLoS One Research Article BACKGROUND: Ferroptosis has exhibited great potential in the treatment of cancer and has gained widespread attention in soft tissue sarcoma (STS). The aim was to explore the immunological and prognostic significance of novel ferroptosis-related genes in STS. METHODS: We identified ferroptosis-related differentially expressed genes (DEGs) in STS to construct the networks of enrichment analysis and protein-protein interaction. Subsequently, hub genes with prognostic significance were localized and a series of prognostic and immune analyses were performed. RESULTS: 40 ferroptosis-related DEGs were identified, of which HELLS, STMN1 EPAS1, CXCL2, NQO1, and IL6 were classified as hub genes and were associated with the prognosis in STS patients. In the results of the immune analysis, PDCD1, CTLA4, TIGIT, IDO1 and CD27 exhibited consistent intense correlations as immune checkpoint genes, as well as macrophage, neutrophil, cytotoxic cell, dendritic cell, interdigitating dendritic cell and plasmacytoid dendritic cell as immune cells. EPAS1 and HELLS might be independent prognostic factors for STS patients, and separate prognostic models were constructed by using them. CONCLUSIONS: We recognized novel ferroptosis-related genes with prognostic value in STS. Furthermore, we searched out potential immune checkpoints and critical immune cells. Public Library of Science 2022-01-04 /pmc/articles/PMC8726495/ /pubmed/34982796 http://dx.doi.org/10.1371/journal.pone.0262234 Text en © 2022 Zhao et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhao, Jiazheng
Zhao, Yi
Ma, Xiaowei
Feng, Helin
Cui, Rongmin
Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
title Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
title_full Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
title_fullStr Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
title_full_unstemmed Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
title_short Immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
title_sort immunological and prognostic significance of novel ferroptosis-related genes in soft tissue sarcoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8726495/
https://www.ncbi.nlm.nih.gov/pubmed/34982796
http://dx.doi.org/10.1371/journal.pone.0262234
work_keys_str_mv AT zhaojiazheng immunologicalandprognosticsignificanceofnovelferroptosisrelatedgenesinsofttissuesarcoma
AT zhaoyi immunologicalandprognosticsignificanceofnovelferroptosisrelatedgenesinsofttissuesarcoma
AT maxiaowei immunologicalandprognosticsignificanceofnovelferroptosisrelatedgenesinsofttissuesarcoma
AT fenghelin immunologicalandprognosticsignificanceofnovelferroptosisrelatedgenesinsofttissuesarcoma
AT cuirongmin immunologicalandprognosticsignificanceofnovelferroptosisrelatedgenesinsofttissuesarcoma