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ECO: the Evidence and Conclusion Ontology, an update for 2022

The Evidence and Conclusion Ontology (ECO) is a community resource that provides an ontology of terms used to capture the type of evidence that supports biomedical annotations and assertions. Consistent capture of evidence information with ECO allows tracking of annotation provenance, establishment...

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Autores principales: Nadendla, Suvarna, Jackson, Rebecca, Munro, James, Quaglia, Federica, Mészáros, Bálint, Olley, Dustin, Hobbs, Elizabeth T, Goralski, Stephen M, Chibucos, Marcus, Mungall, Christopher John, Tosatto, Silvio C E, Erill, Ivan, Giglio, Michelle G
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728134/
https://www.ncbi.nlm.nih.gov/pubmed/34986598
http://dx.doi.org/10.1093/nar/gkab1025
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author Nadendla, Suvarna
Jackson, Rebecca
Munro, James
Quaglia, Federica
Mészáros, Bálint
Olley, Dustin
Hobbs, Elizabeth T
Goralski, Stephen M
Chibucos, Marcus
Mungall, Christopher John
Tosatto, Silvio C E
Erill, Ivan
Giglio, Michelle G
author_facet Nadendla, Suvarna
Jackson, Rebecca
Munro, James
Quaglia, Federica
Mészáros, Bálint
Olley, Dustin
Hobbs, Elizabeth T
Goralski, Stephen M
Chibucos, Marcus
Mungall, Christopher John
Tosatto, Silvio C E
Erill, Ivan
Giglio, Michelle G
author_sort Nadendla, Suvarna
collection PubMed
description The Evidence and Conclusion Ontology (ECO) is a community resource that provides an ontology of terms used to capture the type of evidence that supports biomedical annotations and assertions. Consistent capture of evidence information with ECO allows tracking of annotation provenance, establishment of quality control measures, and evidence-based data mining. ECO is in use by dozens of data repositories and resources with both specific and general areas of focus. ECO is continually being expanded and enhanced in response to user requests as well as our aim to adhere to community best-practices for ontology development. The ECO support team engages in multiple collaborations with other ontologies and annotating groups. Here we report on recent updates to the ECO ontology itself as well as associated resources that are available through this project. ECO project products are freely available for download from the project website (https://evidenceontology.org/) and GitHub (https://github.com/evidenceontology/evidenceontology). ECO is released into the public domain under a CC0 1.0 Universal license.
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spelling pubmed-87281342022-01-05 ECO: the Evidence and Conclusion Ontology, an update for 2022 Nadendla, Suvarna Jackson, Rebecca Munro, James Quaglia, Federica Mészáros, Bálint Olley, Dustin Hobbs, Elizabeth T Goralski, Stephen M Chibucos, Marcus Mungall, Christopher John Tosatto, Silvio C E Erill, Ivan Giglio, Michelle G Nucleic Acids Res Database Issue The Evidence and Conclusion Ontology (ECO) is a community resource that provides an ontology of terms used to capture the type of evidence that supports biomedical annotations and assertions. Consistent capture of evidence information with ECO allows tracking of annotation provenance, establishment of quality control measures, and evidence-based data mining. ECO is in use by dozens of data repositories and resources with both specific and general areas of focus. ECO is continually being expanded and enhanced in response to user requests as well as our aim to adhere to community best-practices for ontology development. The ECO support team engages in multiple collaborations with other ontologies and annotating groups. Here we report on recent updates to the ECO ontology itself as well as associated resources that are available through this project. ECO project products are freely available for download from the project website (https://evidenceontology.org/) and GitHub (https://github.com/evidenceontology/evidenceontology). ECO is released into the public domain under a CC0 1.0 Universal license. Oxford University Press 2021-11-19 /pmc/articles/PMC8728134/ /pubmed/34986598 http://dx.doi.org/10.1093/nar/gkab1025 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Nadendla, Suvarna
Jackson, Rebecca
Munro, James
Quaglia, Federica
Mészáros, Bálint
Olley, Dustin
Hobbs, Elizabeth T
Goralski, Stephen M
Chibucos, Marcus
Mungall, Christopher John
Tosatto, Silvio C E
Erill, Ivan
Giglio, Michelle G
ECO: the Evidence and Conclusion Ontology, an update for 2022
title ECO: the Evidence and Conclusion Ontology, an update for 2022
title_full ECO: the Evidence and Conclusion Ontology, an update for 2022
title_fullStr ECO: the Evidence and Conclusion Ontology, an update for 2022
title_full_unstemmed ECO: the Evidence and Conclusion Ontology, an update for 2022
title_short ECO: the Evidence and Conclusion Ontology, an update for 2022
title_sort eco: the evidence and conclusion ontology, an update for 2022
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728134/
https://www.ncbi.nlm.nih.gov/pubmed/34986598
http://dx.doi.org/10.1093/nar/gkab1025
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