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piRBase: integrating piRNA annotation in all aspects

Piwi-interacting RNAs are a type of small noncoding RNA that have various functions. piRBase is a manually curated resource focused on assisting piRNA functional analysis. piRBase release v3.0 is committed to providing more comprehensive piRNA related information. The latest release covers >181 m...

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Detalles Bibliográficos
Autores principales: Wang, Jiajia, Shi, Yirong, Zhou, Honghong, Zhang, Peng, Song, Tingrui, Ying, Zhiye, Yu, Haopeng, Li, Yanyan, Zhao, Yi, Zeng, Xiaoxi, He, Shunmin, Chen, Runsheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728152/
https://www.ncbi.nlm.nih.gov/pubmed/34871445
http://dx.doi.org/10.1093/nar/gkab1012
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author Wang, Jiajia
Shi, Yirong
Zhou, Honghong
Zhang, Peng
Song, Tingrui
Ying, Zhiye
Yu, Haopeng
Li, Yanyan
Zhao, Yi
Zeng, Xiaoxi
He, Shunmin
Chen, Runsheng
author_facet Wang, Jiajia
Shi, Yirong
Zhou, Honghong
Zhang, Peng
Song, Tingrui
Ying, Zhiye
Yu, Haopeng
Li, Yanyan
Zhao, Yi
Zeng, Xiaoxi
He, Shunmin
Chen, Runsheng
author_sort Wang, Jiajia
collection PubMed
description Piwi-interacting RNAs are a type of small noncoding RNA that have various functions. piRBase is a manually curated resource focused on assisting piRNA functional analysis. piRBase release v3.0 is committed to providing more comprehensive piRNA related information. The latest release covers >181 million unique piRNA sequences, including 440 datasets from 44 species. More disease-related piRNAs and piRNA targets have been collected and displayed. The regulatory relationships between piRNAs and targets have been visualized. In addition to the reuse and expansion of the content in the previous version, the latest version has additional new content, including gold standard piRNA sets, piRNA clusters, piRNA variants, splicing-junction piRNAs, and piRNA expression data. In addition, the entire web interface has been redesigned to provide a better experience for users. piRBase release v3.0 is free to access, browse, search, and download at http://bigdata.ibp.ac.cn/piRBase.
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spelling pubmed-87281522022-01-05 piRBase: integrating piRNA annotation in all aspects Wang, Jiajia Shi, Yirong Zhou, Honghong Zhang, Peng Song, Tingrui Ying, Zhiye Yu, Haopeng Li, Yanyan Zhao, Yi Zeng, Xiaoxi He, Shunmin Chen, Runsheng Nucleic Acids Res Database Issue Piwi-interacting RNAs are a type of small noncoding RNA that have various functions. piRBase is a manually curated resource focused on assisting piRNA functional analysis. piRBase release v3.0 is committed to providing more comprehensive piRNA related information. The latest release covers >181 million unique piRNA sequences, including 440 datasets from 44 species. More disease-related piRNAs and piRNA targets have been collected and displayed. The regulatory relationships between piRNAs and targets have been visualized. In addition to the reuse and expansion of the content in the previous version, the latest version has additional new content, including gold standard piRNA sets, piRNA clusters, piRNA variants, splicing-junction piRNAs, and piRNA expression data. In addition, the entire web interface has been redesigned to provide a better experience for users. piRBase release v3.0 is free to access, browse, search, and download at http://bigdata.ibp.ac.cn/piRBase. Oxford University Press 2021-12-06 /pmc/articles/PMC8728152/ /pubmed/34871445 http://dx.doi.org/10.1093/nar/gkab1012 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Wang, Jiajia
Shi, Yirong
Zhou, Honghong
Zhang, Peng
Song, Tingrui
Ying, Zhiye
Yu, Haopeng
Li, Yanyan
Zhao, Yi
Zeng, Xiaoxi
He, Shunmin
Chen, Runsheng
piRBase: integrating piRNA annotation in all aspects
title piRBase: integrating piRNA annotation in all aspects
title_full piRBase: integrating piRNA annotation in all aspects
title_fullStr piRBase: integrating piRNA annotation in all aspects
title_full_unstemmed piRBase: integrating piRNA annotation in all aspects
title_short piRBase: integrating piRNA annotation in all aspects
title_sort pirbase: integrating pirna annotation in all aspects
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728152/
https://www.ncbi.nlm.nih.gov/pubmed/34871445
http://dx.doi.org/10.1093/nar/gkab1012
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