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Automatic classification of literature in systematic reviews on food safety using machine learning

Systematic reviews are used to collect relevant literature to answer a research question in a way that is clear, thorough, unbiased and reproducible. They are implemented as a standard method in the domain of food safety to obtain a literature overview on the state-of-the-art research related to foo...

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Autores principales: van den Bulk, Leonieke M., Bouzembrak, Yamine, Gavai, Anand, Liu, Ningjing, van den Heuvel, Lukas J., Marvin, Hans J.P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728304/
https://www.ncbi.nlm.nih.gov/pubmed/35024621
http://dx.doi.org/10.1016/j.crfs.2021.12.010
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author van den Bulk, Leonieke M.
Bouzembrak, Yamine
Gavai, Anand
Liu, Ningjing
van den Heuvel, Lukas J.
Marvin, Hans J.P.
author_facet van den Bulk, Leonieke M.
Bouzembrak, Yamine
Gavai, Anand
Liu, Ningjing
van den Heuvel, Lukas J.
Marvin, Hans J.P.
author_sort van den Bulk, Leonieke M.
collection PubMed
description Systematic reviews are used to collect relevant literature to answer a research question in a way that is clear, thorough, unbiased and reproducible. They are implemented as a standard method in the domain of food safety to obtain a literature overview on the state-of-the-art research related to food safety topics of interest. A disadvantage to systematic reviews, however, is that this process is time-consuming and requires expert domain knowledge. The work reported here aims to reduce the time needed by an expert to screen all possible relevant articles by applying machine learning techniques to classify the articles automatically as either relevant or not relevant. Eight different machine learning algorithms and ensembles of all combinations of these algorithms were tested on two different systematic reviews on food safety (i.e. chemical hazards in cereals and leafy greens). The results showed that the best performance was obtained by an ensemble of naive Bayes and a support vector machine, resulting in an average decrease of 32.8% in the amount of articles the expert has to read and an average decrease in irrelevant articles of 57.8% while keeping 95% of the relevant articles. It was concluded that automatic classification of the literature in a systematic literature review can support experts in their task and save valuable time without compromising the quality of the review.
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spelling pubmed-87283042022-01-11 Automatic classification of literature in systematic reviews on food safety using machine learning van den Bulk, Leonieke M. Bouzembrak, Yamine Gavai, Anand Liu, Ningjing van den Heuvel, Lukas J. Marvin, Hans J.P. Curr Res Food Sci Research Article Systematic reviews are used to collect relevant literature to answer a research question in a way that is clear, thorough, unbiased and reproducible. They are implemented as a standard method in the domain of food safety to obtain a literature overview on the state-of-the-art research related to food safety topics of interest. A disadvantage to systematic reviews, however, is that this process is time-consuming and requires expert domain knowledge. The work reported here aims to reduce the time needed by an expert to screen all possible relevant articles by applying machine learning techniques to classify the articles automatically as either relevant or not relevant. Eight different machine learning algorithms and ensembles of all combinations of these algorithms were tested on two different systematic reviews on food safety (i.e. chemical hazards in cereals and leafy greens). The results showed that the best performance was obtained by an ensemble of naive Bayes and a support vector machine, resulting in an average decrease of 32.8% in the amount of articles the expert has to read and an average decrease in irrelevant articles of 57.8% while keeping 95% of the relevant articles. It was concluded that automatic classification of the literature in a systematic literature review can support experts in their task and save valuable time without compromising the quality of the review. Elsevier 2021-12-26 /pmc/articles/PMC8728304/ /pubmed/35024621 http://dx.doi.org/10.1016/j.crfs.2021.12.010 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
van den Bulk, Leonieke M.
Bouzembrak, Yamine
Gavai, Anand
Liu, Ningjing
van den Heuvel, Lukas J.
Marvin, Hans J.P.
Automatic classification of literature in systematic reviews on food safety using machine learning
title Automatic classification of literature in systematic reviews on food safety using machine learning
title_full Automatic classification of literature in systematic reviews on food safety using machine learning
title_fullStr Automatic classification of literature in systematic reviews on food safety using machine learning
title_full_unstemmed Automatic classification of literature in systematic reviews on food safety using machine learning
title_short Automatic classification of literature in systematic reviews on food safety using machine learning
title_sort automatic classification of literature in systematic reviews on food safety using machine learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728304/
https://www.ncbi.nlm.nih.gov/pubmed/35024621
http://dx.doi.org/10.1016/j.crfs.2021.12.010
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