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CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis

OBJECTIVE: Growing evidence shows that enhancer RNAs (eRNAs) are pivotal for tumor progression. In this research, our team aimed to identify the survival-related eRNAs and further explore their potential function in glioblastoma (GBM). METHODS: RNA-sequencing data in 31 tumor types were acquired fro...

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Detalles Bibliográficos
Autores principales: Ye, Tao, Li, Lan-lan, Peng, Xue-mei, Li, Qin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8733712/
https://www.ncbi.nlm.nih.gov/pubmed/35003394
http://dx.doi.org/10.1155/2021/8565943
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author Ye, Tao
Li, Lan-lan
Peng, Xue-mei
Li, Qin
author_facet Ye, Tao
Li, Lan-lan
Peng, Xue-mei
Li, Qin
author_sort Ye, Tao
collection PubMed
description OBJECTIVE: Growing evidence shows that enhancer RNAs (eRNAs) are pivotal for tumor progression. In this research, our team aimed to identify the survival-related eRNAs and further explore their potential function in glioblastoma (GBM). METHODS: RNA-sequencing data in 31 tumor types were acquired from TCGA datasets. The survival-related eRNAs were identified by the use of Kaplan-Meier survival analyses and Spearman's correlation analyses. KEGG pathway enrichment analysis was completed to investigate the underlying signal paths of the critical eRNA. Pancancer assays were applied to explore the association between CYP1B1-AS1 and CYP1B1. RESULTS: We identified 74 survival-related eRNAs and focused on CYP1B1-AS1 which displayed the greatest cor value. CYP1B1 was identified as a regulatory target of CYP1B1-AS1. KEGG analyses suggested that CYP1B1-AS1 might play an essential role through CK-CKR mutual effect, complement and coagulation cascades, TNF signal path, and JAK-STAT signal path. The pancancer verification outcomes revealed that CYP1B1-AS1 was related to survival in 4 cancers, i.e., LIHC, KIRP, KICH, and KIRC. Association was discovered between CYP1B1-AS1 and the targeted gene, CYP1B1, in 29 cancer types. CONCLUSION: The outcomes herein provided the first evidence that overexpression of CYP1B1-AS1 might be a potential molecular biomarker for predicting the prognosis of patients with GBM.
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spelling pubmed-87337122022-01-07 CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis Ye, Tao Li, Lan-lan Peng, Xue-mei Li, Qin Dis Markers Research Article OBJECTIVE: Growing evidence shows that enhancer RNAs (eRNAs) are pivotal for tumor progression. In this research, our team aimed to identify the survival-related eRNAs and further explore their potential function in glioblastoma (GBM). METHODS: RNA-sequencing data in 31 tumor types were acquired from TCGA datasets. The survival-related eRNAs were identified by the use of Kaplan-Meier survival analyses and Spearman's correlation analyses. KEGG pathway enrichment analysis was completed to investigate the underlying signal paths of the critical eRNA. Pancancer assays were applied to explore the association between CYP1B1-AS1 and CYP1B1. RESULTS: We identified 74 survival-related eRNAs and focused on CYP1B1-AS1 which displayed the greatest cor value. CYP1B1 was identified as a regulatory target of CYP1B1-AS1. KEGG analyses suggested that CYP1B1-AS1 might play an essential role through CK-CKR mutual effect, complement and coagulation cascades, TNF signal path, and JAK-STAT signal path. The pancancer verification outcomes revealed that CYP1B1-AS1 was related to survival in 4 cancers, i.e., LIHC, KIRP, KICH, and KIRC. Association was discovered between CYP1B1-AS1 and the targeted gene, CYP1B1, in 29 cancer types. CONCLUSION: The outcomes herein provided the first evidence that overexpression of CYP1B1-AS1 might be a potential molecular biomarker for predicting the prognosis of patients with GBM. Hindawi 2021-12-29 /pmc/articles/PMC8733712/ /pubmed/35003394 http://dx.doi.org/10.1155/2021/8565943 Text en Copyright © 2021 Tao Ye et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ye, Tao
Li, Lan-lan
Peng, Xue-mei
Li, Qin
CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis
title CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis
title_full CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis
title_fullStr CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis
title_full_unstemmed CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis
title_short CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis
title_sort cyp1b1-as1 is a novel biomarker in glioblastoma by comprehensive analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8733712/
https://www.ncbi.nlm.nih.gov/pubmed/35003394
http://dx.doi.org/10.1155/2021/8565943
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