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Attention based automated radiology report generation using CNN and LSTM

The automated generation of radiology reports provides X-rays and has tremendous potential to enhance the clinical diagnosis of diseases in patients. A new research direction is gaining increasing attention that involves the use of hybrid approaches based on natural language processing and computer...

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Autores principales: Sirshar, Mehreen, Paracha, Muhammad Faheem Khalil, Akram, Muhammad Usman, Alghamdi, Norah Saleh, Zaidi, Syeda Zainab Yousuf, Fatima, Tatheer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8736265/
https://www.ncbi.nlm.nih.gov/pubmed/34990477
http://dx.doi.org/10.1371/journal.pone.0262209
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author Sirshar, Mehreen
Paracha, Muhammad Faheem Khalil
Akram, Muhammad Usman
Alghamdi, Norah Saleh
Zaidi, Syeda Zainab Yousuf
Fatima, Tatheer
author_facet Sirshar, Mehreen
Paracha, Muhammad Faheem Khalil
Akram, Muhammad Usman
Alghamdi, Norah Saleh
Zaidi, Syeda Zainab Yousuf
Fatima, Tatheer
author_sort Sirshar, Mehreen
collection PubMed
description The automated generation of radiology reports provides X-rays and has tremendous potential to enhance the clinical diagnosis of diseases in patients. A new research direction is gaining increasing attention that involves the use of hybrid approaches based on natural language processing and computer vision techniques to create auto medical report generation systems. The auto report generator, producing radiology reports, will significantly reduce the burden on doctors and assist them in writing manual reports. Because the sensitivity of chest X-ray (CXR) findings provided by existing techniques not adequately accurate, producing comprehensive explanations for medical photographs remains a difficult task. A novel approach to address this issue was proposed, based on the continuous integration of convolutional neural networks and long short-term memory for detecting diseases, followed by the attention mechanism for sequence generation based on these diseases. Experimental results obtained by using the Indiana University CXR and MIMIC-CXR datasets showed that the proposed model attained the current state-of-the-art efficiency as opposed to other solutions of the baseline. BLEU-1, BLEU-2, BLEU-3, and BLEU-4 were used as the evaluation metrics.
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spelling pubmed-87362652022-01-07 Attention based automated radiology report generation using CNN and LSTM Sirshar, Mehreen Paracha, Muhammad Faheem Khalil Akram, Muhammad Usman Alghamdi, Norah Saleh Zaidi, Syeda Zainab Yousuf Fatima, Tatheer PLoS One Research Article The automated generation of radiology reports provides X-rays and has tremendous potential to enhance the clinical diagnosis of diseases in patients. A new research direction is gaining increasing attention that involves the use of hybrid approaches based on natural language processing and computer vision techniques to create auto medical report generation systems. The auto report generator, producing radiology reports, will significantly reduce the burden on doctors and assist them in writing manual reports. Because the sensitivity of chest X-ray (CXR) findings provided by existing techniques not adequately accurate, producing comprehensive explanations for medical photographs remains a difficult task. A novel approach to address this issue was proposed, based on the continuous integration of convolutional neural networks and long short-term memory for detecting diseases, followed by the attention mechanism for sequence generation based on these diseases. Experimental results obtained by using the Indiana University CXR and MIMIC-CXR datasets showed that the proposed model attained the current state-of-the-art efficiency as opposed to other solutions of the baseline. BLEU-1, BLEU-2, BLEU-3, and BLEU-4 were used as the evaluation metrics. Public Library of Science 2022-01-06 /pmc/articles/PMC8736265/ /pubmed/34990477 http://dx.doi.org/10.1371/journal.pone.0262209 Text en © 2022 Sirshar et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sirshar, Mehreen
Paracha, Muhammad Faheem Khalil
Akram, Muhammad Usman
Alghamdi, Norah Saleh
Zaidi, Syeda Zainab Yousuf
Fatima, Tatheer
Attention based automated radiology report generation using CNN and LSTM
title Attention based automated radiology report generation using CNN and LSTM
title_full Attention based automated radiology report generation using CNN and LSTM
title_fullStr Attention based automated radiology report generation using CNN and LSTM
title_full_unstemmed Attention based automated radiology report generation using CNN and LSTM
title_short Attention based automated radiology report generation using CNN and LSTM
title_sort attention based automated radiology report generation using cnn and lstm
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8736265/
https://www.ncbi.nlm.nih.gov/pubmed/34990477
http://dx.doi.org/10.1371/journal.pone.0262209
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