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Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]

The title compound, C(70)H(70)N(8)O(4)Se(2), is a spiro bicyclic diselenide, made up of two [SeC(6)H(4)CH=N—N(CO)C(6)H(4)(C)C(6)H(3)NEt(2)(O)C(6)H(3)NEt(2)] units related by a twofold crystallographic symmetry element bis­ecting the diselenide bond. The compound crystallizes in a non-centrosymmetric...

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Autores principales: Malla, Manzoor Ahmad, Bansal, Ravi, Butcher, Ray J., Gupta, Sushil K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8739208/
https://www.ncbi.nlm.nih.gov/pubmed/35079413
http://dx.doi.org/10.1107/S2056989021013189
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author Malla, Manzoor Ahmad
Bansal, Ravi
Butcher, Ray J.
Gupta, Sushil K.
author_facet Malla, Manzoor Ahmad
Bansal, Ravi
Butcher, Ray J.
Gupta, Sushil K.
author_sort Malla, Manzoor Ahmad
collection PubMed
description The title compound, C(70)H(70)N(8)O(4)Se(2), is a spiro bicyclic diselenide, made up of two [SeC(6)H(4)CH=N—N(CO)C(6)H(4)(C)C(6)H(3)NEt(2)(O)C(6)H(3)NEt(2)] units related by a twofold crystallographic symmetry element bis­ecting the diselenide bond. The compound crystallizes in a non-centrosymmetric polar space group (tetra­gonal, P [Image: see text] b2) and the structure was refined as an inversion twin. The two diethyl amine groups and their attached phenyl groups of the xanthene ring are disordered over two orientations, with occupancies of 0.664 (19)/0.336 (19) and 0.665 (11)/0.335 (11), respectively. The dihedral angles between the mean planes of the central isoindoline and the phenyl rings are 26.8 (2) and 2.5 (4)°, respectively. The mean plane of the central xanthene ring forms dihedral angles of 2.0 (5), 8.8 (5), 1.7 (5) and 7.9 (6)° with the peripheral phenyl rings. The isoindoline and xanthene rings subtend a dihedral angle of 89.8 (2)°. The mol­ecular conformation is stabilized by an intra­molecular C—H⋯O hydrogen bond generating an S(6) ring motif. In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds together with C—H⋯π (ring) inter­actions, forming a three-dimensional network. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (68.1%), C⋯H/H⋯C (21.2%) and O⋯H/H⋯O (8.7%) contacts. The optimized structure calculated using density functional theory (DFT) at the B3LYP/6 – 31 G(d) level is compared with the experimentally determined mol­ecular structure in the solid state. The HOMO–LUMO behaviour was used to determine the energy gap and the mol­ecular electrostatic potential (MEP) of the compound was investigated.
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spelling pubmed-87392082022-01-24 Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one] Malla, Manzoor Ahmad Bansal, Ravi Butcher, Ray J. Gupta, Sushil K. Acta Crystallogr E Crystallogr Commun Jerry P. Jasinski tribute The title compound, C(70)H(70)N(8)O(4)Se(2), is a spiro bicyclic diselenide, made up of two [SeC(6)H(4)CH=N—N(CO)C(6)H(4)(C)C(6)H(3)NEt(2)(O)C(6)H(3)NEt(2)] units related by a twofold crystallographic symmetry element bis­ecting the diselenide bond. The compound crystallizes in a non-centrosymmetric polar space group (tetra­gonal, P [Image: see text] b2) and the structure was refined as an inversion twin. The two diethyl amine groups and their attached phenyl groups of the xanthene ring are disordered over two orientations, with occupancies of 0.664 (19)/0.336 (19) and 0.665 (11)/0.335 (11), respectively. The dihedral angles between the mean planes of the central isoindoline and the phenyl rings are 26.8 (2) and 2.5 (4)°, respectively. The mean plane of the central xanthene ring forms dihedral angles of 2.0 (5), 8.8 (5), 1.7 (5) and 7.9 (6)° with the peripheral phenyl rings. The isoindoline and xanthene rings subtend a dihedral angle of 89.8 (2)°. The mol­ecular conformation is stabilized by an intra­molecular C—H⋯O hydrogen bond generating an S(6) ring motif. In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds together with C—H⋯π (ring) inter­actions, forming a three-dimensional network. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (68.1%), C⋯H/H⋯C (21.2%) and O⋯H/H⋯O (8.7%) contacts. The optimized structure calculated using density functional theory (DFT) at the B3LYP/6 – 31 G(d) level is compared with the experimentally determined mol­ecular structure in the solid state. The HOMO–LUMO behaviour was used to determine the energy gap and the mol­ecular electrostatic potential (MEP) of the compound was investigated. International Union of Crystallography 2022-01-01 /pmc/articles/PMC8739208/ /pubmed/35079413 http://dx.doi.org/10.1107/S2056989021013189 Text en © Malla et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Jerry P. Jasinski tribute
Malla, Manzoor Ahmad
Bansal, Ravi
Butcher, Ray J.
Gupta, Sushil K.
Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
title Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
title_full Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
title_fullStr Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
title_full_unstemmed Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
title_short Crystal structure, Hirshfeld surface analysis and DFT study of 2,2′′-({[(1E,1′E)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
title_sort crystal structure, hirshfeld surface analysis and dft study of 2,2′′-({[(1e,1′e)-(diselanedi­yl)bis­(2,1-phenyl­ene)]bis­(methane­ylyl­idene)}bis­(aza­neylyl­idene))bis­[3′,6′-bis­(di­ethyl­amino)-4a’,9a’-di­hydro­spiro­[isoindoline-1,9′-xanthen]-3-one]
topic Jerry P. Jasinski tribute
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8739208/
https://www.ncbi.nlm.nih.gov/pubmed/35079413
http://dx.doi.org/10.1107/S2056989021013189
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