Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China

Acer leipoense is a rare and endangered species of the Sapindaceae with a very restricted distribution in Sichuan, China. In this study, the complete chloroplast genome of A. leipoense was characterized by de novo assembly using high-throughput sequencing. The chloroplast genome was 155,702 bp in le...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Qiaoyun, Wang, Ao, Gao, Yongwei, Zhao, Liangcheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8741232/
https://www.ncbi.nlm.nih.gov/pubmed/35005237
http://dx.doi.org/10.1080/23802359.2021.2017369
_version_ 1784629439207833600
author Liu, Qiaoyun
Wang, Ao
Gao, Yongwei
Zhao, Liangcheng
author_facet Liu, Qiaoyun
Wang, Ao
Gao, Yongwei
Zhao, Liangcheng
author_sort Liu, Qiaoyun
collection PubMed
description Acer leipoense is a rare and endangered species of the Sapindaceae with a very restricted distribution in Sichuan, China. In this study, the complete chloroplast genome of A. leipoense was characterized by de novo assembly using high-throughput sequencing. The chloroplast genome was 155,702 bp in length; it contained a large single copy region (85,890 bp) and a small single copy region (18,100 bp), which were separated by a pair of 25,856-bp inverted repeat regions. A total of 128 genes were predicted, including 83 protein-coding genes, 37 tRNA genes, and eight rRNA genes. A phylogenetic analysis of 23 chloroplast genome sequences from the genus Acer revealed that A. leipoense was closely related to A. yangbiense.
format Online
Article
Text
id pubmed-8741232
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-87412322022-01-08 Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China Liu, Qiaoyun Wang, Ao Gao, Yongwei Zhao, Liangcheng Mitochondrial DNA B Resour Mitogenome Announcement Acer leipoense is a rare and endangered species of the Sapindaceae with a very restricted distribution in Sichuan, China. In this study, the complete chloroplast genome of A. leipoense was characterized by de novo assembly using high-throughput sequencing. The chloroplast genome was 155,702 bp in length; it contained a large single copy region (85,890 bp) and a small single copy region (18,100 bp), which were separated by a pair of 25,856-bp inverted repeat regions. A total of 128 genes were predicted, including 83 protein-coding genes, 37 tRNA genes, and eight rRNA genes. A phylogenetic analysis of 23 chloroplast genome sequences from the genus Acer revealed that A. leipoense was closely related to A. yangbiense. Taylor & Francis 2022-01-05 /pmc/articles/PMC8741232/ /pubmed/35005237 http://dx.doi.org/10.1080/23802359.2021.2017369 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Qiaoyun
Wang, Ao
Gao, Yongwei
Zhao, Liangcheng
Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
title Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
title_full Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
title_fullStr Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
title_full_unstemmed Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
title_short Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
title_sort complete chloroplast genome and phylogenetic analysis of acer leipoense (sapindaceae), a rare plant from southwest china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8741232/
https://www.ncbi.nlm.nih.gov/pubmed/35005237
http://dx.doi.org/10.1080/23802359.2021.2017369
work_keys_str_mv AT liuqiaoyun completechloroplastgenomeandphylogeneticanalysisofacerleipoensesapindaceaearareplantfromsouthwestchina
AT wangao completechloroplastgenomeandphylogeneticanalysisofacerleipoensesapindaceaearareplantfromsouthwestchina
AT gaoyongwei completechloroplastgenomeandphylogeneticanalysisofacerleipoensesapindaceaearareplantfromsouthwestchina
AT zhaoliangcheng completechloroplastgenomeandphylogeneticanalysisofacerleipoensesapindaceaearareplantfromsouthwestchina

Ejemplares similares