Cargando…

A year living with SARS-CoV-2: an epidemiological overview of viral lineage circulation by whole-genome sequencing in Barcelona city (Catalonia, Spain)

Herein, we describe the genetic diversity of circulating SARS-CoV-2 viruses by whole-genome sequencing (WGS) in Barcelona city (Catalonia, Spain) throughout the first four pandemic waves. From weeks 11/2020–24/2021, SARS-CoV-2-positive respiratory samples were randomly selected per clinical setting...

Descripción completa

Detalles Bibliográficos
Autores principales:	Andrés, Cristina, Piñana, Maria, Borràs-Bermejo, Blanca, González-Sánchez, Alejandra, García-Cehic, Damir, Esperalba, Juliana, Rando, Ariadna, Zules-Oña, Ricardo-Gabriel, Campos, Carolina, Codina, Maria Gema, Blanco-Grau, Albert, Colomer-Castell, Sergi, Martín, Maria Carmen, Castillo, Carla, García-Comuñas, Karen, Vásquez-Mercado, Rodrigo, Martins-Martins, Reginaldo, Saubi, Narcís, Campins-Martí, Magda, Pumarola, Tomàs, Quer, Josep, Antón, Andrés
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Taylor & Francis 2022
Materias:	Coronaviruses
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8741249/ https://www.ncbi.nlm.nih.gov/pubmed/34842496 http://dx.doi.org/10.1080/22221751.2021.2011617

Ejemplares similares

Molecular characterization and clinical impact of human bocavirus at a tertiary hospital in Barcelona (Catalonia, Spain) during the 2014–2017 seasons
por: Piñana, Maria, et al.
Publicado: (2022)

Detection of reassortant influenza B strains from 2004 to 2015 seasons in Barcelona (Catalonia, Spain) by whole genome sequencing
por: Andrés, Cristina, et al.
Publicado: (2023)

Characteristics of 24 SARS-CoV-2-Sequenced Reinfection Cases in a Tertiary Hospital in Spain
por: Borras-Bermejo, Blanca, et al.
Publicado: (2022)

Enterovirus D68 in Hospitalized Children, Barcelona, Spain, 2014–2021
por: Andrés, Cristina, et al.
Publicado: (2022)

Host-dependent editing of SARS-CoV-2 in COVID-19 patients
por: Gregori, Josep, et al.
Publicado: (2021)

The frequency of defective genomes in Omicron differs from that of the Alpha, Beta and Delta variants
por: Campos, Carolina, et al.
Publicado: (2022)

Naturally occurring SARS-CoV-2 gene deletions close to the spike S1/S2 cleavage site in the viral quasispecies of COVID19 patients
por: Andrés, Cristina, et al.
Publicado: (2020)

Bioinformatic Tools for NGS-Based Metagenomics to Improve the Clinical Diagnosis of Emerging, Re-Emerging and New Viruses
por: Ibañez-Lligoña, Marta, et al.
Publicado: (2023)

Next-Generation Sequencing for Confronting Virus Pandemics
por: Quer, Josep, et al.
Publicado: (2022)

Surveillance of enteroviruses from paediatric patients attended at a tertiary hospital in Catalonia from 2014 to 2017
por: Andrés, Cristina, et al.
Publicado: (2019)

Molecular influenza surveillance at a tertiary university hospital during four consecutive seasons (2012–2016) in Catalonia, Spain
por: Andrés, Cristina, et al.
Publicado: (2019)

Asymptomatic SARS-CoV-2 Infection in Nursing Homes, Barcelona, Spain, April 2020
por: Borras-Bermejo, Blanca, et al.
Publicado: (2020)

Prevalence of Hepatitis C Virus Infection, Genotypes and Subtypes in Migrants from Pakistan in Barcelona, Spain
por: Dopico, Eva, et al.
Publicado: (2022)

A molecular epidemiological study of human parainfluenza virus type 3 at a tertiary university hospital during 2013–2015 in Catalonia, Spain
por: Godoy, Cristina, et al.
Publicado: (2016)

Insights into immune evasion of human metapneumovirus: novel 180- and 111-nucleotide duplications within viral G gene throughout 2014-2017 seasons in Barcelona, Spain
por: Piñana, Maria, et al.
Publicado: (2020)

COVID-19: an opportunity of systematic integration for Chagas disease. Example of a community-based approach within the Bolivian population in Barcelona
por: Gómez i Prat, Jordi, et al.
Publicado: (2022)

Enterovirus-A71 Rhombencephalitis Outbreak in Catalonia: Characteristics, Management and Outcome
por: Wörner, Núria, et al.
Publicado: (2021)

Molecular epidemiology of circulating human coronaviruses in children at a tertiary hospital in Catalonia (Spain) from 2014 to 2016
por: Ramón, Javier, et al.
Publicado: (2016)

The Importance of Rapid Influenza Testing in Pediatric Primary Care: Experience During Three Consecutive Influenza Seasons (2016–2019) in Barcelona (Catalonia, Spain)
por: van Esso, Diego, et al.
Publicado: (2020)

Evaluation of Seegene Allplex Respiratory Panel 1 kit for the detection of influenza virus and human respiratory syncytial virus
por: Gimferrer, Laura, et al.
Publicado: (2018)

Coordinated Response to Imported Vaccine-Derived Poliovirus Infection, Barcelona, Spain, 2019–2020
por: Álamo-Junquera, Dolores, et al.
Publicado: (2021)

Microorganisms as Shapers of Human Civilization, from Pandemics to Even Our Genomes: Villains or Friends? A Historical Approach
por: Rodríguez-Frías, Francisco, et al.
Publicado: (2021)

First Enterovirus D68 (EV-D68) cases detected in hospitalised patients in a tertiary care university hospital in Spain, October 2014
por: Gimferrer, Laura, et al.
Publicado: (2015)

Virological evidence of the impact of non-pharmaceutical interventions against COVID-19 in Ecuador, a resource-limited setting
por: Moreira-Soto, Andres, et al.
Publicado: (2023)

Effect of oral antiseptics in reducing SARS-CoV-2 infectivity: evidence from a randomized double-blind clinical trial
por: Sánchez Barrueco, Álvaro, et al.
Publicado: (2022)

Viral populations of SARS-CoV-2 in upper respiratory tract, placenta, amniotic fluid and umbilical cord blood support viral replication in placenta
por: Piñana, Maria, et al.
Publicado: (2021)

Plasma miRNA profile at COVID-19 onset predicts severity status and mortality
por: Fernández-Pato, Asier, et al.
Publicado: (2022)

Phase 4 clinical trials in the era of the Coronavirus Disease (COVID-19) pandemic and their importance to optimize the COVID-19 vaccination
por: Ralise, Ana Eliza Garcia, et al.
Publicado: (2023)

Identification of circulating microRNA profiles associated with pulmonary function and radiologic features in survivors of SARS-CoV-2-induced ARDS
por: García-Hidalgo, María C., et al.
Publicado: (2022)

Decision-making on childhood vaccination against COVID-19 by nurses in Cyprus: A cross-sectional online survey
por: Kyprianidou, Maria, et al.
Publicado: (2023)

Efficacy of vaccination against the SARS-CoV-2 virus in patients with chronic kidney disease on hemodialysis
por: Sanhueza, María E., et al.
Publicado: (2023)

Influenza vaccination in coronavirus times: Primary Care professionals’ intention to get vaccinated in Central Catalonia (VAGCOVID). A cross sectional study
por: Muñoz-Miralles, Raquel, et al.
Publicado: (2022)

Isolation of SARS-CoV-2 strains carrying a nucleotide mutation, leading to a stop codon in the ORF 6 protein
por: Delbue, Serena, et al.
Publicado: (2021)

Associations between SARS-CoV-2 infection and incidence of new chronic condition diagnoses: a systematic review
por: Gaudet, Lindsay A., et al.
Publicado: (2023)

The role of dendritic cells in COVID-19 infection
por: Wang, Xuying, et al.
Publicado: (2023)

Hybrid immunity and protection against infection during the Omicron wave in Malta
por: Cauchi, John Paul, et al.
Publicado: (2023)

Phenotypic insecticide resistance in arbovirus mosquito vectors in Catalonia and its capital Barcelona (Spain)
por: Paaijmans, Krijn, et al.
Publicado: (2019)

Reinfection rate and disease severity of the BA.5 Omicron SARS-CoV-2 lineage compared to previously circulating variants of concern in the Canary Islands (Spain)
por: Ciuffreda, Laura, et al.
Publicado: (2023)

Immunogenicity, safety and reactogenicity of heterologous (third dose) booster vaccination with a full or fractional dose of two different COVID-19 vaccines: A phase 4, single-blind, randomized controlled trial in adults
por: Costa Clemens, Sue Ann, et al.
Publicado: (2023)

Mumps: MMR vaccination and genetic diversity of mumps virus, 2007–2011 in Catalonia, Spain
por: Barrabeig, Irene, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_e468c55fjt80qetnlmvs3hsapg