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Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network

Patients with diabetes are more likely to be infected with Coronavirus disease 2019 (COVID-19), and the risk of death is significantly higher than ordinary patients. Dipeptidyl peptidase-4 (DPP4) is one of the functional receptor of human coronavirus. Exploring the relationship between diabetes mell...

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Autores principales: Gao, Qian, Zhang, Wenjun, Li, Tingting, Yang, Guojun, Zhu, Wei, Chen, Naijun, Jin, Huawei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8741798/
https://www.ncbi.nlm.nih.gov/pubmed/34996987
http://dx.doi.org/10.1038/s41598-021-03912-6
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author Gao, Qian
Zhang, Wenjun
Li, Tingting
Yang, Guojun
Zhu, Wei
Chen, Naijun
Jin, Huawei
author_facet Gao, Qian
Zhang, Wenjun
Li, Tingting
Yang, Guojun
Zhu, Wei
Chen, Naijun
Jin, Huawei
author_sort Gao, Qian
collection PubMed
description Patients with diabetes are more likely to be infected with Coronavirus disease 2019 (COVID-19), and the risk of death is significantly higher than ordinary patients. Dipeptidyl peptidase-4 (DPP4) is one of the functional receptor of human coronavirus. Exploring the relationship between diabetes mellitus targets and DPP4 is particularly important for the management of patients with diabetes and COVID-19. We intend to study the protein interaction through the protein interaction network in order to find a new clue for the management of patients with diabetes with COVID-19. Diabetes mellitus targets were obtained from GeneCards database. Targets with a relevance score exceeding 20 were included, and DPP4 protein was added manually. The initial protein interaction network was obtained through String. The targets directly related to DPP4 were selected as the final analysis targets. Importing them into String again to obtain the protein interaction network. Module identification, gene ontology (GO) analysis and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis were carried out respectively. The impact of DPP4 on the whole network was analyzed by scoring the module where it located. 43 DPP4-related proteins were finally selected from the diabetes mellitus targets and three functional modules were found by the cluster analysis. Module 1 was involved in insulin secretion and glucagon signaling pathway, module 2 and module 3 were involved in signaling receptor binding. The scoring results showed that LEP and apoB in module 1 were the highest, and the scores of INS, IL6 and ALB of cross module associated proteins of module 1 were the highest. DPP4 is widely associated with key proteins in diabetes mellitus. COVID-19 may affect DPP4 in patients with diabetes mellitus, leading to high mortality of diabetes mellitus combined with COVID-19. DPP4 inhibitors and IL-6 antagonists can be considered to reduce the effect of COVID-19 infection on patients with diabetes.
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spelling pubmed-87417982022-01-10 Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network Gao, Qian Zhang, Wenjun Li, Tingting Yang, Guojun Zhu, Wei Chen, Naijun Jin, Huawei Sci Rep Article Patients with diabetes are more likely to be infected with Coronavirus disease 2019 (COVID-19), and the risk of death is significantly higher than ordinary patients. Dipeptidyl peptidase-4 (DPP4) is one of the functional receptor of human coronavirus. Exploring the relationship between diabetes mellitus targets and DPP4 is particularly important for the management of patients with diabetes and COVID-19. We intend to study the protein interaction through the protein interaction network in order to find a new clue for the management of patients with diabetes with COVID-19. Diabetes mellitus targets were obtained from GeneCards database. Targets with a relevance score exceeding 20 were included, and DPP4 protein was added manually. The initial protein interaction network was obtained through String. The targets directly related to DPP4 were selected as the final analysis targets. Importing them into String again to obtain the protein interaction network. Module identification, gene ontology (GO) analysis and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis were carried out respectively. The impact of DPP4 on the whole network was analyzed by scoring the module where it located. 43 DPP4-related proteins were finally selected from the diabetes mellitus targets and three functional modules were found by the cluster analysis. Module 1 was involved in insulin secretion and glucagon signaling pathway, module 2 and module 3 were involved in signaling receptor binding. The scoring results showed that LEP and apoB in module 1 were the highest, and the scores of INS, IL6 and ALB of cross module associated proteins of module 1 were the highest. DPP4 is widely associated with key proteins in diabetes mellitus. COVID-19 may affect DPP4 in patients with diabetes mellitus, leading to high mortality of diabetes mellitus combined with COVID-19. DPP4 inhibitors and IL-6 antagonists can be considered to reduce the effect of COVID-19 infection on patients with diabetes. Nature Publishing Group UK 2022-01-07 /pmc/articles/PMC8741798/ /pubmed/34996987 http://dx.doi.org/10.1038/s41598-021-03912-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gao, Qian
Zhang, Wenjun
Li, Tingting
Yang, Guojun
Zhu, Wei
Chen, Naijun
Jin, Huawei
Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network
title Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network
title_full Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network
title_fullStr Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network
title_full_unstemmed Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network
title_short Interrelationship between 2019-nCov receptor DPP4 and diabetes mellitus targets based on protein interaction network
title_sort interrelationship between 2019-ncov receptor dpp4 and diabetes mellitus targets based on protein interaction network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8741798/
https://www.ncbi.nlm.nih.gov/pubmed/34996987
http://dx.doi.org/10.1038/s41598-021-03912-6
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