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Predicting the prognosis of glioma by pyroptosis‐related signature

Glioma is the most common malignant primary brain tumour. It is of great significance for the prognosis and personalized treatment of glioma patients to accurate identification of glioma based on biomarkers. Pyroptosis, a kind of programmed cell death, is closely related to tumour progression and tu...

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Autores principales: Chao, Bo, Jiang, Fenjun, Bai, Huiru, Meng, Peipei, Wang, Lu, Wang, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8742236/
https://www.ncbi.nlm.nih.gov/pubmed/34816605
http://dx.doi.org/10.1111/jcmm.17061
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author Chao, Bo
Jiang, Fenjun
Bai, Huiru
Meng, Peipei
Wang, Lu
Wang, Fei
author_facet Chao, Bo
Jiang, Fenjun
Bai, Huiru
Meng, Peipei
Wang, Lu
Wang, Fei
author_sort Chao, Bo
collection PubMed
description Glioma is the most common malignant primary brain tumour. It is of great significance for the prognosis and personalized treatment of glioma patients to accurate identification of glioma based on biomarkers. Pyroptosis, a kind of programmed cell death, is closely related to tumour progression and tumour immune microenvironment. However, the role of pyroptosis in glioma remained unclear. Herein, we used glioma clinical and expression data from TCGA and CGGA to explore the relationship between pyroptosis and glioma. We first summarized the incidence of copy number variations and somatic mutations of 33 pyroptosis‐related genes and explored prognostic correlation of these genes. Based on pyroptosis‐related genes, three molecular subgroups of glioma related to prognosis were identified. We also found that each subgroup has unique immune and biological behaviours characteristics. Finally, based on 7 pyroptosis‐related genes (CASP3, CASP4, CASP6, CASP8, CASP9, PRKACA and ELANE), we constructed a prognosis model by Lasso and Cox regression, which had a strong predictive power for the overall survival in CGGA test cohort (p < 0.05). In summary, we explored the role of pyroptosis‐related genes in gliomas and the association of these genes with tumour immunity. We found the biomarkers valuable to diagnosis and prognosis, hence, provide reference to the development and treatment of tumorigenesis in glioma.
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spelling pubmed-87422362022-01-12 Predicting the prognosis of glioma by pyroptosis‐related signature Chao, Bo Jiang, Fenjun Bai, Huiru Meng, Peipei Wang, Lu Wang, Fei J Cell Mol Med Original Articles Glioma is the most common malignant primary brain tumour. It is of great significance for the prognosis and personalized treatment of glioma patients to accurate identification of glioma based on biomarkers. Pyroptosis, a kind of programmed cell death, is closely related to tumour progression and tumour immune microenvironment. However, the role of pyroptosis in glioma remained unclear. Herein, we used glioma clinical and expression data from TCGA and CGGA to explore the relationship between pyroptosis and glioma. We first summarized the incidence of copy number variations and somatic mutations of 33 pyroptosis‐related genes and explored prognostic correlation of these genes. Based on pyroptosis‐related genes, three molecular subgroups of glioma related to prognosis were identified. We also found that each subgroup has unique immune and biological behaviours characteristics. Finally, based on 7 pyroptosis‐related genes (CASP3, CASP4, CASP6, CASP8, CASP9, PRKACA and ELANE), we constructed a prognosis model by Lasso and Cox regression, which had a strong predictive power for the overall survival in CGGA test cohort (p < 0.05). In summary, we explored the role of pyroptosis‐related genes in gliomas and the association of these genes with tumour immunity. We found the biomarkers valuable to diagnosis and prognosis, hence, provide reference to the development and treatment of tumorigenesis in glioma. John Wiley and Sons Inc. 2021-11-23 2022-01 /pmc/articles/PMC8742236/ /pubmed/34816605 http://dx.doi.org/10.1111/jcmm.17061 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Chao, Bo
Jiang, Fenjun
Bai, Huiru
Meng, Peipei
Wang, Lu
Wang, Fei
Predicting the prognosis of glioma by pyroptosis‐related signature
title Predicting the prognosis of glioma by pyroptosis‐related signature
title_full Predicting the prognosis of glioma by pyroptosis‐related signature
title_fullStr Predicting the prognosis of glioma by pyroptosis‐related signature
title_full_unstemmed Predicting the prognosis of glioma by pyroptosis‐related signature
title_short Predicting the prognosis of glioma by pyroptosis‐related signature
title_sort predicting the prognosis of glioma by pyroptosis‐related signature
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8742236/
https://www.ncbi.nlm.nih.gov/pubmed/34816605
http://dx.doi.org/10.1111/jcmm.17061
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