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UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington

PURPOSE: This article describes the Humphrey field analyzer (HFA) dataset from the Department of Ophthalmology at the University of Washington. METHODS: Pointwise sensitivities were extracted from HFA 24-2, stimulus III visual fields (VF). Total deviation (TD), mean TD (MTD), pattern deviation, and...

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Autores principales: Montesano, Giovanni, Chen, Andrew, Lu, Randy, Lee, Cecilia S., Lee, Aaron Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8742531/
https://www.ncbi.nlm.nih.gov/pubmed/34978561
http://dx.doi.org/10.1167/tvst.11.1.1
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author Montesano, Giovanni
Chen, Andrew
Lu, Randy
Lee, Cecilia S.
Lee, Aaron Y.
author_facet Montesano, Giovanni
Chen, Andrew
Lu, Randy
Lee, Cecilia S.
Lee, Aaron Y.
author_sort Montesano, Giovanni
collection PubMed
description PURPOSE: This article describes the Humphrey field analyzer (HFA) dataset from the Department of Ophthalmology at the University of Washington. METHODS: Pointwise sensitivities were extracted from HFA 24-2, stimulus III visual fields (VF). Total deviation (TD), mean TD (MTD), pattern deviation, and pattern standard deviation (PSD) were calculated. Progression analysis was performed with simple linear regression on global, regional, and pointwise values for VF series with greater than four tests spanning at least four months. VF data were extracted independently of clinical information except for patient age, gender, and laterality RESULTS: This dataset includes 28,943 VFs from 7248 eyes of 3871 patients. Progression was calculated for 2985 eyes from 1579 patients. Median [interquartile range] age was 64 years [54, 73], and follow-up was 2.49 years [1.11, 5.03]. Baseline MTD was −4.51 dB [−8.01, −2.65], and baseline PSD was 2.41 dB [1.7, 5.34]. CONCLUSION: MTD was found to decrease by −0.10 dB/yr [−0.40, 0.11] in eyes for which progression analysis was able to be performed. VFs with deep localized defects, PSD > 12 dB and MTD −15 dB to −25 dB, were plotted, visually inspected, and found to be consistent with neurologic or glaucomatous VFs from patients. For a small number of tests, extracted sensitivity values were compared to corresponding printouts and confirmed to match. TRANSLATIONAL RELEVANCE: This open access pointwise VF dataset serves as a source of raw data for investigation such as VF behavior, clinical comparisons to trials, and development of new machine learning algorithms.
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spelling pubmed-87425312022-01-18 UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington Montesano, Giovanni Chen, Andrew Lu, Randy Lee, Cecilia S. Lee, Aaron Y. Transl Vis Sci Technol Data Science PURPOSE: This article describes the Humphrey field analyzer (HFA) dataset from the Department of Ophthalmology at the University of Washington. METHODS: Pointwise sensitivities were extracted from HFA 24-2, stimulus III visual fields (VF). Total deviation (TD), mean TD (MTD), pattern deviation, and pattern standard deviation (PSD) were calculated. Progression analysis was performed with simple linear regression on global, regional, and pointwise values for VF series with greater than four tests spanning at least four months. VF data were extracted independently of clinical information except for patient age, gender, and laterality RESULTS: This dataset includes 28,943 VFs from 7248 eyes of 3871 patients. Progression was calculated for 2985 eyes from 1579 patients. Median [interquartile range] age was 64 years [54, 73], and follow-up was 2.49 years [1.11, 5.03]. Baseline MTD was −4.51 dB [−8.01, −2.65], and baseline PSD was 2.41 dB [1.7, 5.34]. CONCLUSION: MTD was found to decrease by −0.10 dB/yr [−0.40, 0.11] in eyes for which progression analysis was able to be performed. VFs with deep localized defects, PSD > 12 dB and MTD −15 dB to −25 dB, were plotted, visually inspected, and found to be consistent with neurologic or glaucomatous VFs from patients. For a small number of tests, extracted sensitivity values were compared to corresponding printouts and confirmed to match. TRANSLATIONAL RELEVANCE: This open access pointwise VF dataset serves as a source of raw data for investigation such as VF behavior, clinical comparisons to trials, and development of new machine learning algorithms. The Association for Research in Vision and Ophthalmology 2022-01-03 /pmc/articles/PMC8742531/ /pubmed/34978561 http://dx.doi.org/10.1167/tvst.11.1.1 Text en Copyright 2022 The Authors https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License.
spellingShingle Data Science
Montesano, Giovanni
Chen, Andrew
Lu, Randy
Lee, Cecilia S.
Lee, Aaron Y.
UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington
title UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington
title_full UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington
title_fullStr UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington
title_full_unstemmed UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington
title_short UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington
title_sort uwhvf: a real-world, open source dataset of perimetry tests from the humphrey field analyzer at the university of washington
topic Data Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8742531/
https://www.ncbi.nlm.nih.gov/pubmed/34978561
http://dx.doi.org/10.1167/tvst.11.1.1
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