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Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas
PURPOSE: To analyze the relationship between titin (TTN) mutation gene and tumor mutational burden (TMB) and the with prognosis of lung squamous cell carcinomas (LUSC), and to explore the feasibility of TTN as a potential prognostic marker of for LUSC. METHODS: We analyzed the somatic mutation lands...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8742622/ https://www.ncbi.nlm.nih.gov/pubmed/35018111 http://dx.doi.org/10.2147/IJGM.S343259 |
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author | Zou, Sheng Ye, Jiayue Hu, Sheng Wei, Yiping Xu, Jianjun |
author_facet | Zou, Sheng Ye, Jiayue Hu, Sheng Wei, Yiping Xu, Jianjun |
author_sort | Zou, Sheng |
collection | PubMed |
description | PURPOSE: To analyze the relationship between titin (TTN) mutation gene and tumor mutational burden (TMB) and the with prognosis of lung squamous cell carcinomas (LUSC), and to explore the feasibility of TTN as a potential prognostic marker of for LUSC. METHODS: We analyzed the somatic mutation landscape of LUSC samples using datasets obtained from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) databases. Sequence data were divided into wild and mutant groups, and differences in TMB values between the groups compared using a Mann–Whitney U-test. The Kaplan Meier method was used to analyze the correlation between TTN mutation and LUSC prognosis, whereas CIBERSORT algorithm was used to calculate the degree of relative enrichment degree of among tumor-infiltrating lymphocytes in LUSC. RESULTS: Analysis of both datasets revealed high mutations in the TTN gene, with mutants exhibiting a significantly higher TMB value relative to the wild-type (P < 0.001). Prognosis of the TTN mutant group in LUSC was significantly better than that of wild-type (P = 0.009). Kaplan Meier curves showed that TTN mutation may be an independent prognostic factor in LUSC patients (HR: 0.64, 95% CI 0.48–0.85, P = 0.001), while GSEA analysis revealed that TTN mutation plays a potential role in the development of LUSC. Finally, analysis of LUSC immune microenvironment revealed that TTN mutation was significantly associated with enrichment of macrophages M1 (p < 0.05). CONCLUSION: TTN mutation is associated with TMB, and is positively correlated with prognosis of LUSC. Therefore, this mutation may serve as a potential prognostic indicator of LUSC. |
format | Online Article Text |
id | pubmed-8742622 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-87426222022-01-10 Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas Zou, Sheng Ye, Jiayue Hu, Sheng Wei, Yiping Xu, Jianjun Int J Gen Med Original Research PURPOSE: To analyze the relationship between titin (TTN) mutation gene and tumor mutational burden (TMB) and the with prognosis of lung squamous cell carcinomas (LUSC), and to explore the feasibility of TTN as a potential prognostic marker of for LUSC. METHODS: We analyzed the somatic mutation landscape of LUSC samples using datasets obtained from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) databases. Sequence data were divided into wild and mutant groups, and differences in TMB values between the groups compared using a Mann–Whitney U-test. The Kaplan Meier method was used to analyze the correlation between TTN mutation and LUSC prognosis, whereas CIBERSORT algorithm was used to calculate the degree of relative enrichment degree of among tumor-infiltrating lymphocytes in LUSC. RESULTS: Analysis of both datasets revealed high mutations in the TTN gene, with mutants exhibiting a significantly higher TMB value relative to the wild-type (P < 0.001). Prognosis of the TTN mutant group in LUSC was significantly better than that of wild-type (P = 0.009). Kaplan Meier curves showed that TTN mutation may be an independent prognostic factor in LUSC patients (HR: 0.64, 95% CI 0.48–0.85, P = 0.001), while GSEA analysis revealed that TTN mutation plays a potential role in the development of LUSC. Finally, analysis of LUSC immune microenvironment revealed that TTN mutation was significantly associated with enrichment of macrophages M1 (p < 0.05). CONCLUSION: TTN mutation is associated with TMB, and is positively correlated with prognosis of LUSC. Therefore, this mutation may serve as a potential prognostic indicator of LUSC. Dove 2022-01-04 /pmc/articles/PMC8742622/ /pubmed/35018111 http://dx.doi.org/10.2147/IJGM.S343259 Text en © 2022 Zou et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zou, Sheng Ye, Jiayue Hu, Sheng Wei, Yiping Xu, Jianjun Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas |
title | Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas |
title_full | Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas |
title_fullStr | Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas |
title_full_unstemmed | Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas |
title_short | Mutations in the TTN Gene are a Prognostic Factor for Patients with Lung Squamous Cell Carcinomas |
title_sort | mutations in the ttn gene are a prognostic factor for patients with lung squamous cell carcinomas |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8742622/ https://www.ncbi.nlm.nih.gov/pubmed/35018111 http://dx.doi.org/10.2147/IJGM.S343259 |
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