Cargando…
Identification of isolated or mixed strains from long reads: a challenge met on Streptococcus thermophilus using a MinION sequencer
This study aimed to provide efficient recognition of bacterial strains on personal computers from MinION (Nanopore) long read data. Thanks to the fall in sequencing costs, the identification of bacteria can now proceed by whole genome sequencing. MinION is a fast, but highly error-prone sequencing d...
Autores principales: | Siekaniec, Grégoire, Roux, Emeline, Lemane, Téo, Guédon, Eric, Nicolas, Jacques |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8743539/ https://www.ncbi.nlm.nih.gov/pubmed/34812718 http://dx.doi.org/10.1099/mgen.0.000654 |
Ejemplares similares
-
The genomic basis of the Streptococcus thermophilus health-promoting properties
por: Roux, Emeline, et al.
Publicado: (2022) -
Investigation of chimeric reads using the MinION
por: White, Ruby, et al.
Publicado: (2017) -
Benchmarking the MinION: Evaluating long reads for microbial profiling
por: Leidenfrost, Robert Maximilian, et al.
Publicado: (2020) -
Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches
por: George, Sophie, et al.
Publicado: (2017) -
Corrigendum: Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches
por: George, Sophie, et al.
Publicado: (2018)