Cargando…
Functional Prediction of Biological Profile During Eutrophication in Marine Environment
In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P), and sulfur (S) compounds. The adaptation of the marine micro...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8744080/ https://www.ncbi.nlm.nih.gov/pubmed/35023908 http://dx.doi.org/10.1177/11779322211063993 |
_version_ | 1784630045032054784 |
---|---|
author | Sbaoui, Yousra Nouadi, Badreddine Ezaouine, Abdelkarim Rida Salam, Mohamed Elmessal, Mariame Bennis, Faiza Chegdani, Fatima |
author_facet | Sbaoui, Yousra Nouadi, Badreddine Ezaouine, Abdelkarim Rida Salam, Mohamed Elmessal, Mariame Bennis, Faiza Chegdani, Fatima |
author_sort | Sbaoui, Yousra |
collection | PubMed |
description | In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P), and sulfur (S) compounds. The adaptation of the marine microbiota to this stress involves evolutionary processes through mutations that can provide selective phenotypes. The aim of this in silico analysis is to elucidate the potential candidate hub proteins, biological processes, and key metabolic pathways involved in the pathogenicity of bacterioplankton during excess of nutrients. The analysis was carried out on the model organism Escherichia coli K-12, by adopting an analysis pipeline consisting of a set of packages from the Cystoscape platform. The results obtained show that the metabolism of carbon and sugars generally are the 2 driving mechanisms for the expression of virulence factors. |
format | Online Article Text |
id | pubmed-8744080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-87440802022-01-11 Functional Prediction of Biological Profile During Eutrophication in Marine Environment Sbaoui, Yousra Nouadi, Badreddine Ezaouine, Abdelkarim Rida Salam, Mohamed Elmessal, Mariame Bennis, Faiza Chegdani, Fatima Bioinform Biol Insights Original Research In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P), and sulfur (S) compounds. The adaptation of the marine microbiota to this stress involves evolutionary processes through mutations that can provide selective phenotypes. The aim of this in silico analysis is to elucidate the potential candidate hub proteins, biological processes, and key metabolic pathways involved in the pathogenicity of bacterioplankton during excess of nutrients. The analysis was carried out on the model organism Escherichia coli K-12, by adopting an analysis pipeline consisting of a set of packages from the Cystoscape platform. The results obtained show that the metabolism of carbon and sugars generally are the 2 driving mechanisms for the expression of virulence factors. SAGE Publications 2022-01-05 /pmc/articles/PMC8744080/ /pubmed/35023908 http://dx.doi.org/10.1177/11779322211063993 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Sbaoui, Yousra Nouadi, Badreddine Ezaouine, Abdelkarim Rida Salam, Mohamed Elmessal, Mariame Bennis, Faiza Chegdani, Fatima Functional Prediction of Biological Profile During Eutrophication in Marine Environment |
title | Functional Prediction of Biological Profile During Eutrophication in Marine Environment |
title_full | Functional Prediction of Biological Profile During Eutrophication in Marine Environment |
title_fullStr | Functional Prediction of Biological Profile During Eutrophication in Marine Environment |
title_full_unstemmed | Functional Prediction of Biological Profile During Eutrophication in Marine Environment |
title_short | Functional Prediction of Biological Profile During Eutrophication in Marine Environment |
title_sort | functional prediction of biological profile during eutrophication in marine environment |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8744080/ https://www.ncbi.nlm.nih.gov/pubmed/35023908 http://dx.doi.org/10.1177/11779322211063993 |
work_keys_str_mv | AT sbaouiyousra functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment AT nouadibadreddine functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment AT ezaouineabdelkarim functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment AT ridasalammohamed functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment AT elmessalmariame functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment AT bennisfaiza functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment AT chegdanifatima functionalpredictionofbiologicalprofileduringeutrophicationinmarineenvironment |