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Functional Prediction of Biological Profile During Eutrophication in Marine Environment

In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P), and sulfur (S) compounds. The adaptation of the marine micro...

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Autores principales: Sbaoui, Yousra, Nouadi, Badreddine, Ezaouine, Abdelkarim, Rida Salam, Mohamed, Elmessal, Mariame, Bennis, Faiza, Chegdani, Fatima
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8744080/
https://www.ncbi.nlm.nih.gov/pubmed/35023908
http://dx.doi.org/10.1177/11779322211063993
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author Sbaoui, Yousra
Nouadi, Badreddine
Ezaouine, Abdelkarim
Rida Salam, Mohamed
Elmessal, Mariame
Bennis, Faiza
Chegdani, Fatima
author_facet Sbaoui, Yousra
Nouadi, Badreddine
Ezaouine, Abdelkarim
Rida Salam, Mohamed
Elmessal, Mariame
Bennis, Faiza
Chegdani, Fatima
author_sort Sbaoui, Yousra
collection PubMed
description In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P), and sulfur (S) compounds. The adaptation of the marine microbiota to this stress involves evolutionary processes through mutations that can provide selective phenotypes. The aim of this in silico analysis is to elucidate the potential candidate hub proteins, biological processes, and key metabolic pathways involved in the pathogenicity of bacterioplankton during excess of nutrients. The analysis was carried out on the model organism Escherichia coli K-12, by adopting an analysis pipeline consisting of a set of packages from the Cystoscape platform. The results obtained show that the metabolism of carbon and sugars generally are the 2 driving mechanisms for the expression of virulence factors.
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spelling pubmed-87440802022-01-11 Functional Prediction of Biological Profile During Eutrophication in Marine Environment Sbaoui, Yousra Nouadi, Badreddine Ezaouine, Abdelkarim Rida Salam, Mohamed Elmessal, Mariame Bennis, Faiza Chegdani, Fatima Bioinform Biol Insights Original Research In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P), and sulfur (S) compounds. The adaptation of the marine microbiota to this stress involves evolutionary processes through mutations that can provide selective phenotypes. The aim of this in silico analysis is to elucidate the potential candidate hub proteins, biological processes, and key metabolic pathways involved in the pathogenicity of bacterioplankton during excess of nutrients. The analysis was carried out on the model organism Escherichia coli K-12, by adopting an analysis pipeline consisting of a set of packages from the Cystoscape platform. The results obtained show that the metabolism of carbon and sugars generally are the 2 driving mechanisms for the expression of virulence factors. SAGE Publications 2022-01-05 /pmc/articles/PMC8744080/ /pubmed/35023908 http://dx.doi.org/10.1177/11779322211063993 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research
Sbaoui, Yousra
Nouadi, Badreddine
Ezaouine, Abdelkarim
Rida Salam, Mohamed
Elmessal, Mariame
Bennis, Faiza
Chegdani, Fatima
Functional Prediction of Biological Profile During Eutrophication in Marine Environment
title Functional Prediction of Biological Profile During Eutrophication in Marine Environment
title_full Functional Prediction of Biological Profile During Eutrophication in Marine Environment
title_fullStr Functional Prediction of Biological Profile During Eutrophication in Marine Environment
title_full_unstemmed Functional Prediction of Biological Profile During Eutrophication in Marine Environment
title_short Functional Prediction of Biological Profile During Eutrophication in Marine Environment
title_sort functional prediction of biological profile during eutrophication in marine environment
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8744080/
https://www.ncbi.nlm.nih.gov/pubmed/35023908
http://dx.doi.org/10.1177/11779322211063993
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