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Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar

Poplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth...

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Autores principales: Wei, Hui, Movahedi, Ali, Liu, Guoyuan, Li, Yixin, Liu, Shiwei, Yu, Chunmei, Chen, Yanhong, Zhong, Fei, Zhang, Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8745089/
https://www.ncbi.nlm.nih.gov/pubmed/35008941
http://dx.doi.org/10.3390/ijms23010515
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author Wei, Hui
Movahedi, Ali
Liu, Guoyuan
Li, Yixin
Liu, Shiwei
Yu, Chunmei
Chen, Yanhong
Zhong, Fei
Zhang, Jian
author_facet Wei, Hui
Movahedi, Ali
Liu, Guoyuan
Li, Yixin
Liu, Shiwei
Yu, Chunmei
Chen, Yanhong
Zhong, Fei
Zhang, Jian
author_sort Wei, Hui
collection PubMed
description Poplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth and development, and cooperatively regulating drought resistance, salt tolerance, and various stress responses. However, the features of the PtANN gene family and different stress responses remain unknown in poplar. This study identified 12 PtANN genes in the P. trichocarpa whole-genome and PtANNs divided into three subfamilies based on the phylogenetic tree. The PtANNs clustered into the same clade shared similar gene structures and conserved motifs. The 12 PtANN genes were located in ten chromosomes, and segmental duplication events were illustrated as the main duplication method. Additionally, the PtANN4 homogenous with AtANN1 was detected localized in the cytoplasm and plasma membrane. In addition, expression levels of PtANNs were induced by multiple abiotic stresses, which indicated that PtANNs could widely participate in response to abiotic stress. These results revealed the molecular evolution of PtANNs and their profiles in response to abiotic stress.
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spelling pubmed-87450892022-01-11 Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar Wei, Hui Movahedi, Ali Liu, Guoyuan Li, Yixin Liu, Shiwei Yu, Chunmei Chen, Yanhong Zhong, Fei Zhang, Jian Int J Mol Sci Article Poplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth and development, and cooperatively regulating drought resistance, salt tolerance, and various stress responses. However, the features of the PtANN gene family and different stress responses remain unknown in poplar. This study identified 12 PtANN genes in the P. trichocarpa whole-genome and PtANNs divided into three subfamilies based on the phylogenetic tree. The PtANNs clustered into the same clade shared similar gene structures and conserved motifs. The 12 PtANN genes were located in ten chromosomes, and segmental duplication events were illustrated as the main duplication method. Additionally, the PtANN4 homogenous with AtANN1 was detected localized in the cytoplasm and plasma membrane. In addition, expression levels of PtANNs were induced by multiple abiotic stresses, which indicated that PtANNs could widely participate in response to abiotic stress. These results revealed the molecular evolution of PtANNs and their profiles in response to abiotic stress. MDPI 2022-01-03 /pmc/articles/PMC8745089/ /pubmed/35008941 http://dx.doi.org/10.3390/ijms23010515 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wei, Hui
Movahedi, Ali
Liu, Guoyuan
Li, Yixin
Liu, Shiwei
Yu, Chunmei
Chen, Yanhong
Zhong, Fei
Zhang, Jian
Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
title Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
title_full Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
title_fullStr Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
title_full_unstemmed Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
title_short Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
title_sort genome-wide characterization and abiotic stresses expression analysis of annexin family genes in poplar
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8745089/
https://www.ncbi.nlm.nih.gov/pubmed/35008941
http://dx.doi.org/10.3390/ijms23010515
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