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Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase

The structure of a free nickel (II) octamethylporphyrin (NiOMP) molecule was determined for the first time through a combined gas-phase electron diffraction (GED) and mass spectrometry (MS) experiment, as well as through quantum chemical (QC) calculations. Density functional theory (DFT) calculation...

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Autores principales: Pogonin, Alexander E., Otlyotov, Arseniy A., Minenkov, Yury, Semeikin, Alexander S., Zhabanov, Yuriy A., Shlykov, Sergey A., Girichev, Georgiy V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8745403/
https://www.ncbi.nlm.nih.gov/pubmed/35008747
http://dx.doi.org/10.3390/ijms23010320
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author Pogonin, Alexander E.
Otlyotov, Arseniy A.
Minenkov, Yury
Semeikin, Alexander S.
Zhabanov, Yuriy A.
Shlykov, Sergey A.
Girichev, Georgiy V.
author_facet Pogonin, Alexander E.
Otlyotov, Arseniy A.
Minenkov, Yury
Semeikin, Alexander S.
Zhabanov, Yuriy A.
Shlykov, Sergey A.
Girichev, Georgiy V.
author_sort Pogonin, Alexander E.
collection PubMed
description The structure of a free nickel (II) octamethylporphyrin (NiOMP) molecule was determined for the first time through a combined gas-phase electron diffraction (GED) and mass spectrometry (MS) experiment, as well as through quantum chemical (QC) calculations. Density functional theory (DFT) calculations do not provide an unambiguous answer about the planarity or non-planar distortion of the NiOMP skeleton. The GED refinement in such cases is non-trivial. Several approaches to the inverse problem solution were used. The obtained results allow us to argue that the ruffling effect is manifested in the NiOMP molecule. The minimal critical distance between the central atom of the metal and nitrogen atoms of the coordination cavity that provokes ruffling distortion in metal porphyrins is about 1.96 Å.
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spelling pubmed-87454032022-01-11 Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase Pogonin, Alexander E. Otlyotov, Arseniy A. Minenkov, Yury Semeikin, Alexander S. Zhabanov, Yuriy A. Shlykov, Sergey A. Girichev, Georgiy V. Int J Mol Sci Article The structure of a free nickel (II) octamethylporphyrin (NiOMP) molecule was determined for the first time through a combined gas-phase electron diffraction (GED) and mass spectrometry (MS) experiment, as well as through quantum chemical (QC) calculations. Density functional theory (DFT) calculations do not provide an unambiguous answer about the planarity or non-planar distortion of the NiOMP skeleton. The GED refinement in such cases is non-trivial. Several approaches to the inverse problem solution were used. The obtained results allow us to argue that the ruffling effect is manifested in the NiOMP molecule. The minimal critical distance between the central atom of the metal and nitrogen atoms of the coordination cavity that provokes ruffling distortion in metal porphyrins is about 1.96 Å. MDPI 2021-12-28 /pmc/articles/PMC8745403/ /pubmed/35008747 http://dx.doi.org/10.3390/ijms23010320 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pogonin, Alexander E.
Otlyotov, Arseniy A.
Minenkov, Yury
Semeikin, Alexander S.
Zhabanov, Yuriy A.
Shlykov, Sergey A.
Girichev, Georgiy V.
Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase
title Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase
title_full Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase
title_fullStr Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase
title_full_unstemmed Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase
title_short Molecular Structure of Nickel Octamethylporphyrin—Rare Experimental Evidence of a Ruffling Effect in Gas Phase
title_sort molecular structure of nickel octamethylporphyrin—rare experimental evidence of a ruffling effect in gas phase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8745403/
https://www.ncbi.nlm.nih.gov/pubmed/35008747
http://dx.doi.org/10.3390/ijms23010320
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