Cargando…

Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective

High-quality crystals of a certain polymorphic form of thiobarbituric acid containing both keto and enol tautomers in the asymmetric unit were obtained. High-resolution X-ray diffraction data up to sinθ/λ = 1.0 Å(−1) were collected and subsequently successfully used for the refining of the multipola...

Descripción completa

Detalles Bibliográficos
Autores principales: Grześkiewicz, Anita M., Kubicki, Maciej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8745894/
https://www.ncbi.nlm.nih.gov/pubmed/35009369
http://dx.doi.org/10.3390/ma15010223
_version_ 1784630455778148352
author Grześkiewicz, Anita M.
Kubicki, Maciej
author_facet Grześkiewicz, Anita M.
Kubicki, Maciej
author_sort Grześkiewicz, Anita M.
collection PubMed
description High-quality crystals of a certain polymorphic form of thiobarbituric acid containing both keto and enol tautomers in the asymmetric unit were obtained. High-resolution X-ray diffraction data up to sinθ/λ = 1.0 Å(−1) were collected and subsequently successfully used for the refining of the multipolar model of electron density distribution. The use of a crystal containing both ketone and enol forms allowed a direct comparison of the topological analysis results and a closer look at the differences between these two forms. The similarities and differences between the deformation densities, electrostatic potentials, Laplacian maps and bond characteristics of the tautomers were analysed. Additionally, the spectrum of the intermolecular interactions was identified and studied from classical, relatively strong N-H···O and O-H···O hydrogen bonds through weaker N-H···S hydrogen bonds to weak interactions (for instance, C-H···O, C-H···S and N···O). The results of these studies point toward the importance of including both the geometrical features and the details of the electron density distribution in the analysis of such weak interactions.
format Online
Article
Text
id pubmed-8745894
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-87458942022-01-11 Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective Grześkiewicz, Anita M. Kubicki, Maciej Materials (Basel) Article High-quality crystals of a certain polymorphic form of thiobarbituric acid containing both keto and enol tautomers in the asymmetric unit were obtained. High-resolution X-ray diffraction data up to sinθ/λ = 1.0 Å(−1) were collected and subsequently successfully used for the refining of the multipolar model of electron density distribution. The use of a crystal containing both ketone and enol forms allowed a direct comparison of the topological analysis results and a closer look at the differences between these two forms. The similarities and differences between the deformation densities, electrostatic potentials, Laplacian maps and bond characteristics of the tautomers were analysed. Additionally, the spectrum of the intermolecular interactions was identified and studied from classical, relatively strong N-H···O and O-H···O hydrogen bonds through weaker N-H···S hydrogen bonds to weak interactions (for instance, C-H···O, C-H···S and N···O). The results of these studies point toward the importance of including both the geometrical features and the details of the electron density distribution in the analysis of such weak interactions. MDPI 2021-12-28 /pmc/articles/PMC8745894/ /pubmed/35009369 http://dx.doi.org/10.3390/ma15010223 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Grześkiewicz, Anita M.
Kubicki, Maciej
Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective
title Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective
title_full Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective
title_fullStr Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective
title_full_unstemmed Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective
title_short Two Tautomers of Thiobarbituric Acid in One Crystal: The Experimental Charge Density Perspective
title_sort two tautomers of thiobarbituric acid in one crystal: the experimental charge density perspective
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8745894/
https://www.ncbi.nlm.nih.gov/pubmed/35009369
http://dx.doi.org/10.3390/ma15010223
work_keys_str_mv AT grzeskiewiczanitam twotautomersofthiobarbituricacidinonecrystaltheexperimentalchargedensityperspective
AT kubickimaciej twotautomersofthiobarbituricacidinonecrystaltheexperimentalchargedensityperspective