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Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement

Nanophotonic tweezers represent emerging platforms with significant potential for parallel manipulation and measurements of single biological molecules on-chip. However, trapping force generation represents a substantial obstacle for their broader utility. Here, we present a resonator nanophotonic s...

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Autores principales: Ye, Fan, Inman, James T., Hong, Yifeng, Hall, Porter M., Wang, Michelle D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8748738/
https://www.ncbi.nlm.nih.gov/pubmed/35013276
http://dx.doi.org/10.1038/s41467-021-27709-3
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author Ye, Fan
Inman, James T.
Hong, Yifeng
Hall, Porter M.
Wang, Michelle D.
author_facet Ye, Fan
Inman, James T.
Hong, Yifeng
Hall, Porter M.
Wang, Michelle D.
author_sort Ye, Fan
collection PubMed
description Nanophotonic tweezers represent emerging platforms with significant potential for parallel manipulation and measurements of single biological molecules on-chip. However, trapping force generation represents a substantial obstacle for their broader utility. Here, we present a resonator nanophotonic standing-wave array trap (resonator-nSWAT) that demonstrates significant force enhancement. This platform integrates a critically-coupled resonator design to the nSWAT and incorporates a novel trap reset scheme. The nSWAT can now perform standard single-molecule experiments, including stretching DNA molecules to measure their force-extension relations, unzipping DNA molecules, and disrupting and mapping protein-DNA interactions. These experiments have realized trapping forces on the order of 20 pN while demonstrating base-pair resolution with measurements performed on multiple molecules in parallel. Thus, the resonator-nSWAT platform now meets the benchmarks of a table-top precision optical trapping instrument in terms of force generation and resolution. This represents the first demonstration of a nanophotonic platform for such single-molecule experiments.
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spelling pubmed-87487382022-01-20 Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement Ye, Fan Inman, James T. Hong, Yifeng Hall, Porter M. Wang, Michelle D. Nat Commun Article Nanophotonic tweezers represent emerging platforms with significant potential for parallel manipulation and measurements of single biological molecules on-chip. However, trapping force generation represents a substantial obstacle for their broader utility. Here, we present a resonator nanophotonic standing-wave array trap (resonator-nSWAT) that demonstrates significant force enhancement. This platform integrates a critically-coupled resonator design to the nSWAT and incorporates a novel trap reset scheme. The nSWAT can now perform standard single-molecule experiments, including stretching DNA molecules to measure their force-extension relations, unzipping DNA molecules, and disrupting and mapping protein-DNA interactions. These experiments have realized trapping forces on the order of 20 pN while demonstrating base-pair resolution with measurements performed on multiple molecules in parallel. Thus, the resonator-nSWAT platform now meets the benchmarks of a table-top precision optical trapping instrument in terms of force generation and resolution. This represents the first demonstration of a nanophotonic platform for such single-molecule experiments. Nature Publishing Group UK 2022-01-10 /pmc/articles/PMC8748738/ /pubmed/35013276 http://dx.doi.org/10.1038/s41467-021-27709-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ye, Fan
Inman, James T.
Hong, Yifeng
Hall, Porter M.
Wang, Michelle D.
Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
title Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
title_full Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
title_fullStr Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
title_full_unstemmed Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
title_short Resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
title_sort resonator nanophotonic standing-wave array trap for single-molecule manipulation and measurement
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8748738/
https://www.ncbi.nlm.nih.gov/pubmed/35013276
http://dx.doi.org/10.1038/s41467-021-27709-3
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