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Trauma risk score matching for observational studies in orthopedic trauma dataset and code

The dataset presented was collected via retrospective review from an orthopedic trauma database approved by the institutional review board at the author's institution from patients treated at any of the four hospitals serviced by the academic orthopedic surgery department. Femoral neck and inte...

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Autores principales: Parola, Rown, Ganta, Abhishek, Egol, Kenneth A., Konda, Sanjit R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8749164/
https://www.ncbi.nlm.nih.gov/pubmed/35036491
http://dx.doi.org/10.1016/j.dib.2022.107794
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author Parola, Rown
Ganta, Abhishek
Egol, Kenneth A.
Konda, Sanjit R.
author_facet Parola, Rown
Ganta, Abhishek
Egol, Kenneth A.
Konda, Sanjit R.
author_sort Parola, Rown
collection PubMed
description The dataset presented was collected via retrospective review from an orthopedic trauma database approved by the institutional review board at the author's institution from patients treated at any of the four hospitals serviced by the academic orthopedic surgery department. Femoral neck and intertrochanteric hip fracture patients from low energy mechanisms admitted between October 2014 and February 2020, were selected if they were age 55 or older and had recorded sex, body mass index (BMI), Charlson Comorbidity Index (CCI), American Society of Anaesthesiologists (ASA) physical status classification, Glasgow Coma Score, Abbreviated Injury Severity score for the chest, head and neck, and extremities, and ambulation status prior to injury. The resultant 1,590 subject dataset may be analysed via the supplied R statistical code to determine the frequency of equipoise in baseline and outcome variables from propensity matching via three matching schemes. The code implements three matching schemes including matching by (1) The Score for Trauma Triage in Geriatric and Middle-Aged (STTGMA) (2) CCI alone, or (3) a combination of sex, age, CCI and BMI. The code selects a subset of ten percent of hip fracture patients by a pseudorandom number generator (PRNG). The code matches the remaining patients 1:1 to the selected patients by propensity score generated by logistic regression of STTGMA, CCI, or a combination of sex, age, CCI and BMI using greedy nearest neighbor matching without replacement by the MatchIt package for R software. The code then compares matched cohorts by Chi-square, Fisher, or Mann-Whitney U test with significance level of 0.05 representing a 5% chance of significant differences due to random sampling of subjects. The supplied code repeats the random selection, matching and testing process 100,000 times for each matching method. The resultant code output is the frequency of significantly different demographic or outcome parameters among matched cohorts by matching method. This data and statistical code have reuse potential to explore alternative matching schemes. The supplied baseline variables should be robust enough to derive alternative risk scores for each patient which may be included as a matching variable for comparison. The authors also look forward to unexpected ways that this data may be used by readers.
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spelling pubmed-87491642022-01-13 Trauma risk score matching for observational studies in orthopedic trauma dataset and code Parola, Rown Ganta, Abhishek Egol, Kenneth A. Konda, Sanjit R. Data Brief Data Article The dataset presented was collected via retrospective review from an orthopedic trauma database approved by the institutional review board at the author's institution from patients treated at any of the four hospitals serviced by the academic orthopedic surgery department. Femoral neck and intertrochanteric hip fracture patients from low energy mechanisms admitted between October 2014 and February 2020, were selected if they were age 55 or older and had recorded sex, body mass index (BMI), Charlson Comorbidity Index (CCI), American Society of Anaesthesiologists (ASA) physical status classification, Glasgow Coma Score, Abbreviated Injury Severity score for the chest, head and neck, and extremities, and ambulation status prior to injury. The resultant 1,590 subject dataset may be analysed via the supplied R statistical code to determine the frequency of equipoise in baseline and outcome variables from propensity matching via three matching schemes. The code implements three matching schemes including matching by (1) The Score for Trauma Triage in Geriatric and Middle-Aged (STTGMA) (2) CCI alone, or (3) a combination of sex, age, CCI and BMI. The code selects a subset of ten percent of hip fracture patients by a pseudorandom number generator (PRNG). The code matches the remaining patients 1:1 to the selected patients by propensity score generated by logistic regression of STTGMA, CCI, or a combination of sex, age, CCI and BMI using greedy nearest neighbor matching without replacement by the MatchIt package for R software. The code then compares matched cohorts by Chi-square, Fisher, or Mann-Whitney U test with significance level of 0.05 representing a 5% chance of significant differences due to random sampling of subjects. The supplied code repeats the random selection, matching and testing process 100,000 times for each matching method. The resultant code output is the frequency of significantly different demographic or outcome parameters among matched cohorts by matching method. This data and statistical code have reuse potential to explore alternative matching schemes. The supplied baseline variables should be robust enough to derive alternative risk scores for each patient which may be included as a matching variable for comparison. The authors also look forward to unexpected ways that this data may be used by readers. Elsevier 2022-01-05 /pmc/articles/PMC8749164/ /pubmed/35036491 http://dx.doi.org/10.1016/j.dib.2022.107794 Text en © 2022 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Parola, Rown
Ganta, Abhishek
Egol, Kenneth A.
Konda, Sanjit R.
Trauma risk score matching for observational studies in orthopedic trauma dataset and code
title Trauma risk score matching for observational studies in orthopedic trauma dataset and code
title_full Trauma risk score matching for observational studies in orthopedic trauma dataset and code
title_fullStr Trauma risk score matching for observational studies in orthopedic trauma dataset and code
title_full_unstemmed Trauma risk score matching for observational studies in orthopedic trauma dataset and code
title_short Trauma risk score matching for observational studies in orthopedic trauma dataset and code
title_sort trauma risk score matching for observational studies in orthopedic trauma dataset and code
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8749164/
https://www.ncbi.nlm.nih.gov/pubmed/35036491
http://dx.doi.org/10.1016/j.dib.2022.107794
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