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Reducing sources of variance in experimental procedures in in vitro research
Background: Lack of reproducibility in preclinical research poses ethical and economic challenges for biomedical science. Various institutional activities by society stakeholders of leading industrialised nations are currently underway with the aim of improving the situation. Such initiatives are us...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000 Research Limited
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8749900/ https://www.ncbi.nlm.nih.gov/pubmed/35035893 http://dx.doi.org/10.12688/f1000research.73497.2 |
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author | Fischer, Igor Martinez-Dominguez, Maria Victoria Hänggi, Daniel Kahlert, Ulf |
author_facet | Fischer, Igor Martinez-Dominguez, Maria Victoria Hänggi, Daniel Kahlert, Ulf |
author_sort | Fischer, Igor |
collection | PubMed |
description | Background: Lack of reproducibility in preclinical research poses ethical and economic challenges for biomedical science. Various institutional activities by society stakeholders of leading industrialised nations are currently underway with the aim of improving the situation. Such initiatives are usually concerned with high-level organisational issues and typically do not focus on improving experimental approaches per se. Addressing these is necessary in order to increase consistency and success rates of lab-to-lab repetitions. Methods: In this project, we statistically evaluated repetitive data of a very basic and widely applied lab procedure, namely quantifying the number of viable cells. The purpose of this was to assess the impact of different parameters and instrumentations which may constitute sources of variance in this procedure. Conclusion: By comparing the variability of data acquired under two different procedures, featuring improved stringency of protocol adherence, our project attempts to identify the sources and propose guidelines on how to reduce such fluctuations. We believe our work can contribute to tackling the repeatability crisis in biomedical research. |
format | Online Article Text |
id | pubmed-8749900 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | F1000 Research Limited |
record_format | MEDLINE/PubMed |
spelling | pubmed-87499002022-01-14 Reducing sources of variance in experimental procedures in in vitro research Fischer, Igor Martinez-Dominguez, Maria Victoria Hänggi, Daniel Kahlert, Ulf F1000Res Method Article Background: Lack of reproducibility in preclinical research poses ethical and economic challenges for biomedical science. Various institutional activities by society stakeholders of leading industrialised nations are currently underway with the aim of improving the situation. Such initiatives are usually concerned with high-level organisational issues and typically do not focus on improving experimental approaches per se. Addressing these is necessary in order to increase consistency and success rates of lab-to-lab repetitions. Methods: In this project, we statistically evaluated repetitive data of a very basic and widely applied lab procedure, namely quantifying the number of viable cells. The purpose of this was to assess the impact of different parameters and instrumentations which may constitute sources of variance in this procedure. Conclusion: By comparing the variability of data acquired under two different procedures, featuring improved stringency of protocol adherence, our project attempts to identify the sources and propose guidelines on how to reduce such fluctuations. We believe our work can contribute to tackling the repeatability crisis in biomedical research. F1000 Research Limited 2022-01-07 /pmc/articles/PMC8749900/ /pubmed/35035893 http://dx.doi.org/10.12688/f1000research.73497.2 Text en Copyright: © 2022 Fischer I et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Method Article Fischer, Igor Martinez-Dominguez, Maria Victoria Hänggi, Daniel Kahlert, Ulf Reducing sources of variance in experimental procedures in in vitro research |
title | Reducing sources of variance in experimental procedures in in vitro research |
title_full | Reducing sources of variance in experimental procedures in in vitro research |
title_fullStr | Reducing sources of variance in experimental procedures in in vitro research |
title_full_unstemmed | Reducing sources of variance in experimental procedures in in vitro research |
title_short | Reducing sources of variance in experimental procedures in in vitro research |
title_sort | reducing sources of variance in experimental procedures in in vitro research |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8749900/ https://www.ncbi.nlm.nih.gov/pubmed/35035893 http://dx.doi.org/10.12688/f1000research.73497.2 |
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