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Reducing sources of variance in experimental procedures in in vitro research

Background: Lack of reproducibility in preclinical research poses ethical and economic challenges for biomedical science. Various institutional activities by society stakeholders of leading industrialised nations are currently underway with the aim of improving the situation. Such initiatives are us...

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Detalles Bibliográficos
Autores principales: Fischer, Igor, Martinez-Dominguez, Maria Victoria, Hänggi, Daniel, Kahlert, Ulf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8749900/
https://www.ncbi.nlm.nih.gov/pubmed/35035893
http://dx.doi.org/10.12688/f1000research.73497.2
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author Fischer, Igor
Martinez-Dominguez, Maria Victoria
Hänggi, Daniel
Kahlert, Ulf
author_facet Fischer, Igor
Martinez-Dominguez, Maria Victoria
Hänggi, Daniel
Kahlert, Ulf
author_sort Fischer, Igor
collection PubMed
description Background: Lack of reproducibility in preclinical research poses ethical and economic challenges for biomedical science. Various institutional activities by society stakeholders of leading industrialised nations are currently underway with the aim of improving the situation. Such initiatives are usually concerned with high-level organisational issues and typically do not focus on improving experimental approaches per se. Addressing these is necessary in order to increase consistency and success rates of lab-to-lab repetitions. Methods: In this project, we statistically evaluated repetitive data of a very basic and widely applied lab procedure, namely quantifying the number of viable cells. The purpose of this was to assess the impact of different parameters and instrumentations which may constitute sources of variance in this procedure. Conclusion: By comparing the variability of data acquired under two different procedures, featuring improved stringency of protocol adherence, our project attempts to identify the sources and propose guidelines on how to reduce such fluctuations. We believe our work can contribute to tackling the repeatability crisis in biomedical research.
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spelling pubmed-87499002022-01-14 Reducing sources of variance in experimental procedures in in vitro research Fischer, Igor Martinez-Dominguez, Maria Victoria Hänggi, Daniel Kahlert, Ulf F1000Res Method Article Background: Lack of reproducibility in preclinical research poses ethical and economic challenges for biomedical science. Various institutional activities by society stakeholders of leading industrialised nations are currently underway with the aim of improving the situation. Such initiatives are usually concerned with high-level organisational issues and typically do not focus on improving experimental approaches per se. Addressing these is necessary in order to increase consistency and success rates of lab-to-lab repetitions. Methods: In this project, we statistically evaluated repetitive data of a very basic and widely applied lab procedure, namely quantifying the number of viable cells. The purpose of this was to assess the impact of different parameters and instrumentations which may constitute sources of variance in this procedure. Conclusion: By comparing the variability of data acquired under two different procedures, featuring improved stringency of protocol adherence, our project attempts to identify the sources and propose guidelines on how to reduce such fluctuations. We believe our work can contribute to tackling the repeatability crisis in biomedical research. F1000 Research Limited 2022-01-07 /pmc/articles/PMC8749900/ /pubmed/35035893 http://dx.doi.org/10.12688/f1000research.73497.2 Text en Copyright: © 2022 Fischer I et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method Article
Fischer, Igor
Martinez-Dominguez, Maria Victoria
Hänggi, Daniel
Kahlert, Ulf
Reducing sources of variance in experimental procedures in in vitro research
title Reducing sources of variance in experimental procedures in in vitro research
title_full Reducing sources of variance in experimental procedures in in vitro research
title_fullStr Reducing sources of variance in experimental procedures in in vitro research
title_full_unstemmed Reducing sources of variance in experimental procedures in in vitro research
title_short Reducing sources of variance in experimental procedures in in vitro research
title_sort reducing sources of variance in experimental procedures in in vitro research
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8749900/
https://www.ncbi.nlm.nih.gov/pubmed/35035893
http://dx.doi.org/10.12688/f1000research.73497.2
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