The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)

Quercus sessilifolia Blume is one of the dominant tree species in East Asian evergreen broadleaved forests. In this study, we assembled and characterized the plastome of Q. sessilifolia using Illumina paired-end data. The circular genome is 160,813 bp in size, consisting of two copies of inverted re...

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Autores principales: Chen, Shuifei, Zhang, Wenwen, Li, Yao, Ge, Xiaomin, Zhou, Xu, Hu, Yaping, Ding, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8751490/
https://www.ncbi.nlm.nih.gov/pubmed/35028413
http://dx.doi.org/10.1080/23802359.2021.2017366
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author Chen, Shuifei
Zhang, Wenwen
Li, Yao
Ge, Xiaomin
Zhou, Xu
Hu, Yaping
Ding, Hui
author_facet Chen, Shuifei
Zhang, Wenwen
Li, Yao
Ge, Xiaomin
Zhou, Xu
Hu, Yaping
Ding, Hui
author_sort Chen, Shuifei
collection PubMed
description Quercus sessilifolia Blume is one of the dominant tree species in East Asian evergreen broadleaved forests. In this study, we assembled and characterized the plastome of Q. sessilifolia using Illumina paired-end data. The circular genome is 160,813 bp in size, consisting of two copies of inverted repeat (IR) regions of 25,862 bp, one large single-copy (LSC) region of 90,218 bp, and one small single-copy (SSC) region of 18,871 bp. It encodes a total of 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on 28 chloroplast genome sequences indicated that Q. sessilifolia was most closely related to Q. myrsinifolia with 90% bootstrap support.
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spelling pubmed-87514902022-01-12 The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae) Chen, Shuifei Zhang, Wenwen Li, Yao Ge, Xiaomin Zhou, Xu Hu, Yaping Ding, Hui Mitochondrial DNA B Resour Mitogenome Announcement Quercus sessilifolia Blume is one of the dominant tree species in East Asian evergreen broadleaved forests. In this study, we assembled and characterized the plastome of Q. sessilifolia using Illumina paired-end data. The circular genome is 160,813 bp in size, consisting of two copies of inverted repeat (IR) regions of 25,862 bp, one large single-copy (LSC) region of 90,218 bp, and one small single-copy (SSC) region of 18,871 bp. It encodes a total of 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on 28 chloroplast genome sequences indicated that Q. sessilifolia was most closely related to Q. myrsinifolia with 90% bootstrap support. Taylor & Francis 2022-01-10 /pmc/articles/PMC8751490/ /pubmed/35028413 http://dx.doi.org/10.1080/23802359.2021.2017366 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Shuifei
Zhang, Wenwen
Li, Yao
Ge, Xiaomin
Zhou, Xu
Hu, Yaping
Ding, Hui
The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)
title The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)
title_full The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)
title_fullStr The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)
title_full_unstemmed The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)
title_short The complete chloroplast genome sequence of Quercus sessilifolia Blume (Fagaceae)
title_sort complete chloroplast genome sequence of quercus sessilifolia blume (fagaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8751490/
https://www.ncbi.nlm.nih.gov/pubmed/35028413
http://dx.doi.org/10.1080/23802359.2021.2017366
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