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A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma

Pyroptosis, a pro-inflammatory form of programmed cell death, is associated with carcinogenesis and progression. However, there is little information concerning pyroptosis-related genes (PRGs) in laryngeal squamous cell carcinoma (LSCC). Herein, we aim to explore the prognostic value of PRGs in LSCC...

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Autores principales: Zhou, Chongchang, Zhan, Guowen, Jin, Yangli, Chen, Jianneng, Shen, Zhisen, Shen, Yi, Deng, Hongxia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8751611/
https://www.ncbi.nlm.nih.gov/pubmed/34910689
http://dx.doi.org/10.18632/aging.203783
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author Zhou, Chongchang
Zhan, Guowen
Jin, Yangli
Chen, Jianneng
Shen, Zhisen
Shen, Yi
Deng, Hongxia
author_facet Zhou, Chongchang
Zhan, Guowen
Jin, Yangli
Chen, Jianneng
Shen, Zhisen
Shen, Yi
Deng, Hongxia
author_sort Zhou, Chongchang
collection PubMed
description Pyroptosis, a pro-inflammatory form of programmed cell death, is associated with carcinogenesis and progression. However, there is little information concerning pyroptosis-related genes (PRGs) in laryngeal squamous cell carcinoma (LSCC). Herein, we aim to explore the prognostic value of PRGs in LSCC. The expression and clinical data of 47 PRGs in LSCC patients were obtained from The Cancer Genome Atlas. A novel prognostic PRG signature was constructed using least absolute shrinkage and selection operator analysis. Receiver operating characteristic (ROC) curves were drawn, and Kaplan-Meier survival Cox proportional hazard regression analyses were performed to measure the predictive capacity of the PRG signature. Furthermore, we constructed a six-PRG signature to divide LSCC patients into high- and low-risk groups. Patients in the high-risk group had worse overall survival than the low-risk group. The area under the time-dependent ROC curve was 0.696 for 1 year, 0.784 for 3 years, and 0.738 for 5 years. We proved that the PRGs signature was an independent predictor for LSCC. Functional enrichment analysis indicated that several immune-related pathways were significantly enriched in the low-risk group. Consistent with this, patients with low-risk scores had higher immune scores and better immunotherapeutic responses than the high-risk group. In conclusion, we established a novel PRGs signature that can predict outcome and response to immunotherapy of LSCC, pyroptosis may be a potential target for LSCC.
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spelling pubmed-87516112022-01-12 A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma Zhou, Chongchang Zhan, Guowen Jin, Yangli Chen, Jianneng Shen, Zhisen Shen, Yi Deng, Hongxia Aging (Albany NY) Research Paper Pyroptosis, a pro-inflammatory form of programmed cell death, is associated with carcinogenesis and progression. However, there is little information concerning pyroptosis-related genes (PRGs) in laryngeal squamous cell carcinoma (LSCC). Herein, we aim to explore the prognostic value of PRGs in LSCC. The expression and clinical data of 47 PRGs in LSCC patients were obtained from The Cancer Genome Atlas. A novel prognostic PRG signature was constructed using least absolute shrinkage and selection operator analysis. Receiver operating characteristic (ROC) curves were drawn, and Kaplan-Meier survival Cox proportional hazard regression analyses were performed to measure the predictive capacity of the PRG signature. Furthermore, we constructed a six-PRG signature to divide LSCC patients into high- and low-risk groups. Patients in the high-risk group had worse overall survival than the low-risk group. The area under the time-dependent ROC curve was 0.696 for 1 year, 0.784 for 3 years, and 0.738 for 5 years. We proved that the PRGs signature was an independent predictor for LSCC. Functional enrichment analysis indicated that several immune-related pathways were significantly enriched in the low-risk group. Consistent with this, patients with low-risk scores had higher immune scores and better immunotherapeutic responses than the high-risk group. In conclusion, we established a novel PRGs signature that can predict outcome and response to immunotherapy of LSCC, pyroptosis may be a potential target for LSCC. Impact Journals 2021-12-15 /pmc/articles/PMC8751611/ /pubmed/34910689 http://dx.doi.org/10.18632/aging.203783 Text en Copyright: © 2021 Zhou et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhou, Chongchang
Zhan, Guowen
Jin, Yangli
Chen, Jianneng
Shen, Zhisen
Shen, Yi
Deng, Hongxia
A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
title A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
title_full A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
title_fullStr A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
title_full_unstemmed A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
title_short A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
title_sort novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8751611/
https://www.ncbi.nlm.nih.gov/pubmed/34910689
http://dx.doi.org/10.18632/aging.203783
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