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A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma
Pyroptosis, a pro-inflammatory form of programmed cell death, is associated with carcinogenesis and progression. However, there is little information concerning pyroptosis-related genes (PRGs) in laryngeal squamous cell carcinoma (LSCC). Herein, we aim to explore the prognostic value of PRGs in LSCC...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8751611/ https://www.ncbi.nlm.nih.gov/pubmed/34910689 http://dx.doi.org/10.18632/aging.203783 |
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author | Zhou, Chongchang Zhan, Guowen Jin, Yangli Chen, Jianneng Shen, Zhisen Shen, Yi Deng, Hongxia |
author_facet | Zhou, Chongchang Zhan, Guowen Jin, Yangli Chen, Jianneng Shen, Zhisen Shen, Yi Deng, Hongxia |
author_sort | Zhou, Chongchang |
collection | PubMed |
description | Pyroptosis, a pro-inflammatory form of programmed cell death, is associated with carcinogenesis and progression. However, there is little information concerning pyroptosis-related genes (PRGs) in laryngeal squamous cell carcinoma (LSCC). Herein, we aim to explore the prognostic value of PRGs in LSCC. The expression and clinical data of 47 PRGs in LSCC patients were obtained from The Cancer Genome Atlas. A novel prognostic PRG signature was constructed using least absolute shrinkage and selection operator analysis. Receiver operating characteristic (ROC) curves were drawn, and Kaplan-Meier survival Cox proportional hazard regression analyses were performed to measure the predictive capacity of the PRG signature. Furthermore, we constructed a six-PRG signature to divide LSCC patients into high- and low-risk groups. Patients in the high-risk group had worse overall survival than the low-risk group. The area under the time-dependent ROC curve was 0.696 for 1 year, 0.784 for 3 years, and 0.738 for 5 years. We proved that the PRGs signature was an independent predictor for LSCC. Functional enrichment analysis indicated that several immune-related pathways were significantly enriched in the low-risk group. Consistent with this, patients with low-risk scores had higher immune scores and better immunotherapeutic responses than the high-risk group. In conclusion, we established a novel PRGs signature that can predict outcome and response to immunotherapy of LSCC, pyroptosis may be a potential target for LSCC. |
format | Online Article Text |
id | pubmed-8751611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-87516112022-01-12 A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma Zhou, Chongchang Zhan, Guowen Jin, Yangli Chen, Jianneng Shen, Zhisen Shen, Yi Deng, Hongxia Aging (Albany NY) Research Paper Pyroptosis, a pro-inflammatory form of programmed cell death, is associated with carcinogenesis and progression. However, there is little information concerning pyroptosis-related genes (PRGs) in laryngeal squamous cell carcinoma (LSCC). Herein, we aim to explore the prognostic value of PRGs in LSCC. The expression and clinical data of 47 PRGs in LSCC patients were obtained from The Cancer Genome Atlas. A novel prognostic PRG signature was constructed using least absolute shrinkage and selection operator analysis. Receiver operating characteristic (ROC) curves were drawn, and Kaplan-Meier survival Cox proportional hazard regression analyses were performed to measure the predictive capacity of the PRG signature. Furthermore, we constructed a six-PRG signature to divide LSCC patients into high- and low-risk groups. Patients in the high-risk group had worse overall survival than the low-risk group. The area under the time-dependent ROC curve was 0.696 for 1 year, 0.784 for 3 years, and 0.738 for 5 years. We proved that the PRGs signature was an independent predictor for LSCC. Functional enrichment analysis indicated that several immune-related pathways were significantly enriched in the low-risk group. Consistent with this, patients with low-risk scores had higher immune scores and better immunotherapeutic responses than the high-risk group. In conclusion, we established a novel PRGs signature that can predict outcome and response to immunotherapy of LSCC, pyroptosis may be a potential target for LSCC. Impact Journals 2021-12-15 /pmc/articles/PMC8751611/ /pubmed/34910689 http://dx.doi.org/10.18632/aging.203783 Text en Copyright: © 2021 Zhou et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhou, Chongchang Zhan, Guowen Jin, Yangli Chen, Jianneng Shen, Zhisen Shen, Yi Deng, Hongxia A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
title | A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
title_full | A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
title_fullStr | A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
title_full_unstemmed | A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
title_short | A novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
title_sort | novel pyroptosis-related gene signature to predict outcomes in laryngeal squamous cell carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8751611/ https://www.ncbi.nlm.nih.gov/pubmed/34910689 http://dx.doi.org/10.18632/aging.203783 |
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