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K-means for shared frailty models
BACKGROUND: The purpose of this research was to see how the k-means algorithm can be applied to survival analysis with single events per subject for defining groups, which can then be modeled in a shared frailty model to further allow the capturing the unmeasured confounding not already explained by...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8753884/ https://www.ncbi.nlm.nih.gov/pubmed/35021993 http://dx.doi.org/10.1186/s12874-021-01424-5 |
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author | Govindarajulu, Usha Bedi, Sandeep |
author_facet | Govindarajulu, Usha Bedi, Sandeep |
author_sort | Govindarajulu, Usha |
collection | PubMed |
description | BACKGROUND: The purpose of this research was to see how the k-means algorithm can be applied to survival analysis with single events per subject for defining groups, which can then be modeled in a shared frailty model to further allow the capturing the unmeasured confounding not already explained by the covariates in the model. METHODS: For this purpose we developed our own k-means survival grouping algorithm to handle this approach. We compared a regular shared frailty model with a regular grouping variable and a shared frailty model with a k-means grouping variable in simulations as well as analysis on a real dataset. RESULTS: We found that in both simulations as well as real data showed that our k-means clustering is no different than the typical frailty clustering even under different situations of varied case rates and censoring. It appeared our k-means algorithm could be a trustworthy mechanism of creating groups from data when no grouping term exists for including in a frailty term in a survival model or comparing to an existing grouping variable available in the current data to use in a frailty model. |
format | Online Article Text |
id | pubmed-8753884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-87538842022-01-18 K-means for shared frailty models Govindarajulu, Usha Bedi, Sandeep BMC Med Res Methodol Research BACKGROUND: The purpose of this research was to see how the k-means algorithm can be applied to survival analysis with single events per subject for defining groups, which can then be modeled in a shared frailty model to further allow the capturing the unmeasured confounding not already explained by the covariates in the model. METHODS: For this purpose we developed our own k-means survival grouping algorithm to handle this approach. We compared a regular shared frailty model with a regular grouping variable and a shared frailty model with a k-means grouping variable in simulations as well as analysis on a real dataset. RESULTS: We found that in both simulations as well as real data showed that our k-means clustering is no different than the typical frailty clustering even under different situations of varied case rates and censoring. It appeared our k-means algorithm could be a trustworthy mechanism of creating groups from data when no grouping term exists for including in a frailty term in a survival model or comparing to an existing grouping variable available in the current data to use in a frailty model. BioMed Central 2022-01-12 /pmc/articles/PMC8753884/ /pubmed/35021993 http://dx.doi.org/10.1186/s12874-021-01424-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Govindarajulu, Usha Bedi, Sandeep K-means for shared frailty models |
title | K-means for shared frailty models |
title_full | K-means for shared frailty models |
title_fullStr | K-means for shared frailty models |
title_full_unstemmed | K-means for shared frailty models |
title_short | K-means for shared frailty models |
title_sort | k-means for shared frailty models |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8753884/ https://www.ncbi.nlm.nih.gov/pubmed/35021993 http://dx.doi.org/10.1186/s12874-021-01424-5 |
work_keys_str_mv | AT govindarajuluusha kmeansforsharedfrailtymodels AT bedisandeep kmeansforsharedfrailtymodels |