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Diagnosing COVID-19 in human serum using Raman spectroscopy
This study proposed the diagnosis of COVID-19 by means of Raman spectroscopy. Samples of blood serum from 10 patients positive and 10 patients negative for COVID-19 by RT-PCR RNA and ELISA tests were analyzed. Raman spectra were obtained with a dispersive Raman spectrometer (830 nm, 350 mW) in tripl...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer London
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8758209/ https://www.ncbi.nlm.nih.gov/pubmed/35028768 http://dx.doi.org/10.1007/s10103-021-03488-7 |
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author | Goulart, Ana Cristina Castro Silveira, Landulfo Carvalho, Henrique Cunha Dorta, Cristiane Bissoli Pacheco, Marcos Tadeu T. Zângaro, Renato Amaro |
author_facet | Goulart, Ana Cristina Castro Silveira, Landulfo Carvalho, Henrique Cunha Dorta, Cristiane Bissoli Pacheco, Marcos Tadeu T. Zângaro, Renato Amaro |
author_sort | Goulart, Ana Cristina Castro |
collection | PubMed |
description | This study proposed the diagnosis of COVID-19 by means of Raman spectroscopy. Samples of blood serum from 10 patients positive and 10 patients negative for COVID-19 by RT-PCR RNA and ELISA tests were analyzed. Raman spectra were obtained with a dispersive Raman spectrometer (830 nm, 350 mW) in triplicate, being submitted to exploratory analysis with principal component analysis (PCA) to identify the spectral differences and discriminant analysis with PCA (PCA-DA) and partial least squares (PLS-DA) for classification of the blood serum spectra into Control and COVID-19. The spectra of both groups positive and negative for COVID-19 showed peaks referred to the basal constitution of the serum (mainly albumin). The difference spectra showed decrease in the peaks referred to proteins and amino acids for the group positive. PCA variables showed more detailed spectral differences related to the biochemical alterations due to the COVID-19 such as increase in lipids, nitrogen compounds (urea and amines/amides) and nucleic acids, and decrease of proteins and amino acids (tryptophan) in the COVID-19 group. The discriminant analysis applied to the principal component loadings (PC2, PC4, PC5, and PC6) could classify spectra with 87% sensitivity and 100% specificity compared to 95% sensitivity and 100% specificity indicated in the RT-PCR kit leaflet, demonstrating the possibilities of a rapid, label-free, and costless technique for diagnosing COVID-19 infection. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10103-021-03488-7. |
format | Online Article Text |
id | pubmed-8758209 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer London |
record_format | MEDLINE/PubMed |
spelling | pubmed-87582092022-01-14 Diagnosing COVID-19 in human serum using Raman spectroscopy Goulart, Ana Cristina Castro Silveira, Landulfo Carvalho, Henrique Cunha Dorta, Cristiane Bissoli Pacheco, Marcos Tadeu T. Zângaro, Renato Amaro Lasers Med Sci Original Article This study proposed the diagnosis of COVID-19 by means of Raman spectroscopy. Samples of blood serum from 10 patients positive and 10 patients negative for COVID-19 by RT-PCR RNA and ELISA tests were analyzed. Raman spectra were obtained with a dispersive Raman spectrometer (830 nm, 350 mW) in triplicate, being submitted to exploratory analysis with principal component analysis (PCA) to identify the spectral differences and discriminant analysis with PCA (PCA-DA) and partial least squares (PLS-DA) for classification of the blood serum spectra into Control and COVID-19. The spectra of both groups positive and negative for COVID-19 showed peaks referred to the basal constitution of the serum (mainly albumin). The difference spectra showed decrease in the peaks referred to proteins and amino acids for the group positive. PCA variables showed more detailed spectral differences related to the biochemical alterations due to the COVID-19 such as increase in lipids, nitrogen compounds (urea and amines/amides) and nucleic acids, and decrease of proteins and amino acids (tryptophan) in the COVID-19 group. The discriminant analysis applied to the principal component loadings (PC2, PC4, PC5, and PC6) could classify spectra with 87% sensitivity and 100% specificity compared to 95% sensitivity and 100% specificity indicated in the RT-PCR kit leaflet, demonstrating the possibilities of a rapid, label-free, and costless technique for diagnosing COVID-19 infection. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10103-021-03488-7. Springer London 2022-01-14 2022 /pmc/articles/PMC8758209/ /pubmed/35028768 http://dx.doi.org/10.1007/s10103-021-03488-7 Text en © The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Article Goulart, Ana Cristina Castro Silveira, Landulfo Carvalho, Henrique Cunha Dorta, Cristiane Bissoli Pacheco, Marcos Tadeu T. Zângaro, Renato Amaro Diagnosing COVID-19 in human serum using Raman spectroscopy |
title | Diagnosing COVID-19 in human serum using Raman spectroscopy |
title_full | Diagnosing COVID-19 in human serum using Raman spectroscopy |
title_fullStr | Diagnosing COVID-19 in human serum using Raman spectroscopy |
title_full_unstemmed | Diagnosing COVID-19 in human serum using Raman spectroscopy |
title_short | Diagnosing COVID-19 in human serum using Raman spectroscopy |
title_sort | diagnosing covid-19 in human serum using raman spectroscopy |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8758209/ https://www.ncbi.nlm.nih.gov/pubmed/35028768 http://dx.doi.org/10.1007/s10103-021-03488-7 |
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