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Use of the proteomic tool MALDI-TOF MS in termite identification
Matrix-assisted laser desorption/ionization mass spectrometry (MALDI-TOF MS) has proved effective for the identification of many arthropods. A total of 432 termite specimens were collected in Mali, Cote d’Ivoire, Togo, Senegal, Switzerland and France. Morphologically, 22 species were identified, inc...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8760289/ https://www.ncbi.nlm.nih.gov/pubmed/35031655 http://dx.doi.org/10.1038/s41598-021-04574-0 |
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author | Hasnaoui, Bouthaina Diarra, Adama Zan Berenger, Jean-Michel Medkour, Hacène Benakhla, Ahmed Mediannikov, Oleg Parola, Philippe |
author_facet | Hasnaoui, Bouthaina Diarra, Adama Zan Berenger, Jean-Michel Medkour, Hacène Benakhla, Ahmed Mediannikov, Oleg Parola, Philippe |
author_sort | Hasnaoui, Bouthaina |
collection | PubMed |
description | Matrix-assisted laser desorption/ionization mass spectrometry (MALDI-TOF MS) has proved effective for the identification of many arthropods. A total of 432 termite specimens were collected in Mali, Cote d’Ivoire, Togo, Senegal, Switzerland and France. Morphologically, 22 species were identified, including Ancistrotermes cavithorax, Amitermes evuncifer, Cryptotermes brevis, Cubitermes orthognathus, Kalotermes flavicollis, Macrotermes bellicosus, Macrotermes herus, Macrotermes ivorensis, Macrotermes subhyalinus, Microcerotermes parvus, Microtermes sp., Odontotermes latericius, Procubitermes sjostedti, Promirotermes holmgreni, Reticulitermes grassei, Reticulitermes lucifugus, Reticulitermes santonensis, Trinervitermes geminatus, Trinervitermes occidentalis, Trinervitermes togoensis, Trinervitermes sp., Trinervitermes trinervoides and Trinervitermes trinervius. Analysis of MALDI-TOF MS spectra profiles from termites revealed that all were of high quality, with intra-species reproducibility and inter-species specificity. Blind testing of the spectra of 389 termites against our updated database with the spectra of 43 specimens of different termite species revealed that all were correctly identified with log score values (LSVs) ranging from 1.65 to 2.851, mean 2.290 ± 0.225, median 2.299, and 98.4% (383) had LSVs > 1.8. This study is the first on the use of MALDI-TOF for termite identification and shows its importance as a tool for arthropod taxonomy and reinforces the idea that MALDI-TOF MS is a promising tool in the field of entomology. |
format | Online Article Text |
id | pubmed-8760289 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-87602892022-01-18 Use of the proteomic tool MALDI-TOF MS in termite identification Hasnaoui, Bouthaina Diarra, Adama Zan Berenger, Jean-Michel Medkour, Hacène Benakhla, Ahmed Mediannikov, Oleg Parola, Philippe Sci Rep Article Matrix-assisted laser desorption/ionization mass spectrometry (MALDI-TOF MS) has proved effective for the identification of many arthropods. A total of 432 termite specimens were collected in Mali, Cote d’Ivoire, Togo, Senegal, Switzerland and France. Morphologically, 22 species were identified, including Ancistrotermes cavithorax, Amitermes evuncifer, Cryptotermes brevis, Cubitermes orthognathus, Kalotermes flavicollis, Macrotermes bellicosus, Macrotermes herus, Macrotermes ivorensis, Macrotermes subhyalinus, Microcerotermes parvus, Microtermes sp., Odontotermes latericius, Procubitermes sjostedti, Promirotermes holmgreni, Reticulitermes grassei, Reticulitermes lucifugus, Reticulitermes santonensis, Trinervitermes geminatus, Trinervitermes occidentalis, Trinervitermes togoensis, Trinervitermes sp., Trinervitermes trinervoides and Trinervitermes trinervius. Analysis of MALDI-TOF MS spectra profiles from termites revealed that all were of high quality, with intra-species reproducibility and inter-species specificity. Blind testing of the spectra of 389 termites against our updated database with the spectra of 43 specimens of different termite species revealed that all were correctly identified with log score values (LSVs) ranging from 1.65 to 2.851, mean 2.290 ± 0.225, median 2.299, and 98.4% (383) had LSVs > 1.8. This study is the first on the use of MALDI-TOF for termite identification and shows its importance as a tool for arthropod taxonomy and reinforces the idea that MALDI-TOF MS is a promising tool in the field of entomology. Nature Publishing Group UK 2022-01-14 /pmc/articles/PMC8760289/ /pubmed/35031655 http://dx.doi.org/10.1038/s41598-021-04574-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Hasnaoui, Bouthaina Diarra, Adama Zan Berenger, Jean-Michel Medkour, Hacène Benakhla, Ahmed Mediannikov, Oleg Parola, Philippe Use of the proteomic tool MALDI-TOF MS in termite identification |
title | Use of the proteomic tool MALDI-TOF MS in termite identification |
title_full | Use of the proteomic tool MALDI-TOF MS in termite identification |
title_fullStr | Use of the proteomic tool MALDI-TOF MS in termite identification |
title_full_unstemmed | Use of the proteomic tool MALDI-TOF MS in termite identification |
title_short | Use of the proteomic tool MALDI-TOF MS in termite identification |
title_sort | use of the proteomic tool maldi-tof ms in termite identification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8760289/ https://www.ncbi.nlm.nih.gov/pubmed/35031655 http://dx.doi.org/10.1038/s41598-021-04574-0 |
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