Cargando…

AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks

In this article, we present a multicenter aortic vessel tree database collection, containing 56 aortas and their branches. The datasets have been acquired with computed tomography angiography (CTA) scans and each scan covers the ascending aorta, the aortic arch and its branches into the head/neck ar...

Descripción completa

Detalles Bibliográficos
Autores principales: Radl, Lukas, Jin, Yuan, Pepe, Antonio, Li, Jianning, Gsaxner, Christina, Zhao, Fen-hua, Egger, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8760499/
https://www.ncbi.nlm.nih.gov/pubmed/35059483
http://dx.doi.org/10.1016/j.dib.2022.107801
_version_ 1784633333123121152
author Radl, Lukas
Jin, Yuan
Pepe, Antonio
Li, Jianning
Gsaxner, Christina
Zhao, Fen-hua
Egger, Jan
author_facet Radl, Lukas
Jin, Yuan
Pepe, Antonio
Li, Jianning
Gsaxner, Christina
Zhao, Fen-hua
Egger, Jan
author_sort Radl, Lukas
collection PubMed
description In this article, we present a multicenter aortic vessel tree database collection, containing 56 aortas and their branches. The datasets have been acquired with computed tomography angiography (CTA) scans and each scan covers the ascending aorta, the aortic arch and its branches into the head/neck area, the thoracic aorta, the abdominal aorta and the lower abdominal aorta with the iliac arteries branching into the legs. For each scan, the collection provides a semi-automatically generated segmentation mask of the aortic vessel tree (ground truth). The scans come from three different collections and various hospitals, having various resolutions, which enables studying the geometry/shape variabilities of human aortas and its branches from different geographic locations. Furthermore, creating a robust statistical model of the shape of human aortic vessel trees, which can be used for various tasks such as the development of fully-automatic segmentation algorithms for new, unseen aortic vessel tree cases, e.g. by training deep learning-based approaches. Hence, the collection can serve as an evaluation set for automatic aortic vessel tree segmentation algorithms.
format Online
Article
Text
id pubmed-8760499
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-87604992022-01-19 AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks Radl, Lukas Jin, Yuan Pepe, Antonio Li, Jianning Gsaxner, Christina Zhao, Fen-hua Egger, Jan Data Brief Data Article In this article, we present a multicenter aortic vessel tree database collection, containing 56 aortas and their branches. The datasets have been acquired with computed tomography angiography (CTA) scans and each scan covers the ascending aorta, the aortic arch and its branches into the head/neck area, the thoracic aorta, the abdominal aorta and the lower abdominal aorta with the iliac arteries branching into the legs. For each scan, the collection provides a semi-automatically generated segmentation mask of the aortic vessel tree (ground truth). The scans come from three different collections and various hospitals, having various resolutions, which enables studying the geometry/shape variabilities of human aortas and its branches from different geographic locations. Furthermore, creating a robust statistical model of the shape of human aortic vessel trees, which can be used for various tasks such as the development of fully-automatic segmentation algorithms for new, unseen aortic vessel tree cases, e.g. by training deep learning-based approaches. Hence, the collection can serve as an evaluation set for automatic aortic vessel tree segmentation algorithms. Elsevier 2022-01-06 /pmc/articles/PMC8760499/ /pubmed/35059483 http://dx.doi.org/10.1016/j.dib.2022.107801 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Radl, Lukas
Jin, Yuan
Pepe, Antonio
Li, Jianning
Gsaxner, Christina
Zhao, Fen-hua
Egger, Jan
AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks
title AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks
title_full AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks
title_fullStr AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks
title_full_unstemmed AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks
title_short AVT: Multicenter aortic vessel tree CTA dataset collection with ground truth segmentation masks
title_sort avt: multicenter aortic vessel tree cta dataset collection with ground truth segmentation masks
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8760499/
https://www.ncbi.nlm.nih.gov/pubmed/35059483
http://dx.doi.org/10.1016/j.dib.2022.107801
work_keys_str_mv AT radllukas avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks
AT jinyuan avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks
AT pepeantonio avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks
AT lijianning avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks
AT gsaxnerchristina avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks
AT zhaofenhua avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks
AT eggerjan avtmulticenteraorticvesseltreectadatasetcollectionwithgroundtruthsegmentationmasks