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High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events

Saccharomyces cerevisiae is a leading model system for genome-wide screens, but low-frequency events (e.g., point mutations, recombination events) are difficult to detect with existing approaches. Here, we describe a high-throughput screening technique to detect low-frequency events using high-throu...

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Detalles Bibliográficos
Autores principales: Novarina, Daniele, Rosas Bringas, Fernando R., Rosas Bringas, Omar G., Chang, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8760548/
https://www.ncbi.nlm.nih.gov/pubmed/35059655
http://dx.doi.org/10.1016/j.xpro.2021.101082
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author Novarina, Daniele
Rosas Bringas, Fernando R.
Rosas Bringas, Omar G.
Chang, Michael
author_facet Novarina, Daniele
Rosas Bringas, Fernando R.
Rosas Bringas, Omar G.
Chang, Michael
author_sort Novarina, Daniele
collection PubMed
description Saccharomyces cerevisiae is a leading model system for genome-wide screens, but low-frequency events (e.g., point mutations, recombination events) are difficult to detect with existing approaches. Here, we describe a high-throughput screening technique to detect low-frequency events using high-throughput replica pinning of high-density arrays of yeast colonies. This approach can be used to screen genes that control any process involving low-frequency events for which genetically selectable reporters are available, e.g., spontaneous mutations, recombination, and transcription errors. For complete details on the use and execution of this protocol, please refer to (Novarina et al., 2020a, 2020b).
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spelling pubmed-87605482022-01-19 High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events Novarina, Daniele Rosas Bringas, Fernando R. Rosas Bringas, Omar G. Chang, Michael STAR Protoc Protocol Saccharomyces cerevisiae is a leading model system for genome-wide screens, but low-frequency events (e.g., point mutations, recombination events) are difficult to detect with existing approaches. Here, we describe a high-throughput screening technique to detect low-frequency events using high-throughput replica pinning of high-density arrays of yeast colonies. This approach can be used to screen genes that control any process involving low-frequency events for which genetically selectable reporters are available, e.g., spontaneous mutations, recombination, and transcription errors. For complete details on the use and execution of this protocol, please refer to (Novarina et al., 2020a, 2020b). Elsevier 2022-01-13 /pmc/articles/PMC8760548/ /pubmed/35059655 http://dx.doi.org/10.1016/j.xpro.2021.101082 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Protocol
Novarina, Daniele
Rosas Bringas, Fernando R.
Rosas Bringas, Omar G.
Chang, Michael
High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
title High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
title_full High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
title_fullStr High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
title_full_unstemmed High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
title_short High-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
title_sort high-throughput replica-pinning approach to screen for yeast genes controlling low-frequency events
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8760548/
https://www.ncbi.nlm.nih.gov/pubmed/35059655
http://dx.doi.org/10.1016/j.xpro.2021.101082
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