Cargando…

A data-driven framework for mapping domains of human neurobiology

Functional neuroimaging has been a mainstay of human neuroscience for the past 25 years. Interpretation of fMRI data has often occurred within knowledge frameworks crafted by experts, which have the potential to amplify biases that limit the replicability of findings. Here, we employ a computational...

Descripción completa

Detalles Bibliográficos
Autores principales: Beam, Elizabeth, Potts, Christopher, Poldrack, Russell A., Etkin, Amit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761068/
https://www.ncbi.nlm.nih.gov/pubmed/34764476
http://dx.doi.org/10.1038/s41593-021-00948-9
_version_ 1784633457196924928
author Beam, Elizabeth
Potts, Christopher
Poldrack, Russell A.
Etkin, Amit
author_facet Beam, Elizabeth
Potts, Christopher
Poldrack, Russell A.
Etkin, Amit
author_sort Beam, Elizabeth
collection PubMed
description Functional neuroimaging has been a mainstay of human neuroscience for the past 25 years. Interpretation of fMRI data has often occurred within knowledge frameworks crafted by experts, which have the potential to amplify biases that limit the replicability of findings. Here, we employ a computational approach to derive a data-driven framework for neurobiological domains that synthesizes the texts and data of nearly 20,000 human neuroimaging articles. Across multiple levels of domain specificity, the structure-function links within domains better replicate in held-out articles than those mapped from dominant frameworks in neuroscience and psychiatry. We further show that the data-driven framework partitions the literature into modular subfields, for which domains serve as generalizable prototypes of structure-function patterns in single articles. The approach to computational ontology we present here is the most comprehensive characterization of human brain circuits quantifiable with fMRI and may be extended to synthesize other scientific literatures.
format Online
Article
Text
id pubmed-8761068
institution National Center for Biotechnology Information
language English
publishDate 2021
record_format MEDLINE/PubMed
spelling pubmed-87610682022-05-11 A data-driven framework for mapping domains of human neurobiology Beam, Elizabeth Potts, Christopher Poldrack, Russell A. Etkin, Amit Nat Neurosci Article Functional neuroimaging has been a mainstay of human neuroscience for the past 25 years. Interpretation of fMRI data has often occurred within knowledge frameworks crafted by experts, which have the potential to amplify biases that limit the replicability of findings. Here, we employ a computational approach to derive a data-driven framework for neurobiological domains that synthesizes the texts and data of nearly 20,000 human neuroimaging articles. Across multiple levels of domain specificity, the structure-function links within domains better replicate in held-out articles than those mapped from dominant frameworks in neuroscience and psychiatry. We further show that the data-driven framework partitions the literature into modular subfields, for which domains serve as generalizable prototypes of structure-function patterns in single articles. The approach to computational ontology we present here is the most comprehensive characterization of human brain circuits quantifiable with fMRI and may be extended to synthesize other scientific literatures. 2021-12 2021-11-11 /pmc/articles/PMC8761068/ /pubmed/34764476 http://dx.doi.org/10.1038/s41593-021-00948-9 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: https://www.springernature.com/gp/open-research/policies/accepted-manuscript-terms
spellingShingle Article
Beam, Elizabeth
Potts, Christopher
Poldrack, Russell A.
Etkin, Amit
A data-driven framework for mapping domains of human neurobiology
title A data-driven framework for mapping domains of human neurobiology
title_full A data-driven framework for mapping domains of human neurobiology
title_fullStr A data-driven framework for mapping domains of human neurobiology
title_full_unstemmed A data-driven framework for mapping domains of human neurobiology
title_short A data-driven framework for mapping domains of human neurobiology
title_sort data-driven framework for mapping domains of human neurobiology
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761068/
https://www.ncbi.nlm.nih.gov/pubmed/34764476
http://dx.doi.org/10.1038/s41593-021-00948-9
work_keys_str_mv AT beamelizabeth adatadrivenframeworkformappingdomainsofhumanneurobiology
AT pottschristopher adatadrivenframeworkformappingdomainsofhumanneurobiology
AT poldrackrussella adatadrivenframeworkformappingdomainsofhumanneurobiology
AT etkinamit adatadrivenframeworkformappingdomainsofhumanneurobiology
AT beamelizabeth datadrivenframeworkformappingdomainsofhumanneurobiology
AT pottschristopher datadrivenframeworkformappingdomainsofhumanneurobiology
AT poldrackrussella datadrivenframeworkformappingdomainsofhumanneurobiology
AT etkinamit datadrivenframeworkformappingdomainsofhumanneurobiology