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A data-driven framework for mapping domains of human neurobiology
Functional neuroimaging has been a mainstay of human neuroscience for the past 25 years. Interpretation of fMRI data has often occurred within knowledge frameworks crafted by experts, which have the potential to amplify biases that limit the replicability of findings. Here, we employ a computational...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761068/ https://www.ncbi.nlm.nih.gov/pubmed/34764476 http://dx.doi.org/10.1038/s41593-021-00948-9 |
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author | Beam, Elizabeth Potts, Christopher Poldrack, Russell A. Etkin, Amit |
author_facet | Beam, Elizabeth Potts, Christopher Poldrack, Russell A. Etkin, Amit |
author_sort | Beam, Elizabeth |
collection | PubMed |
description | Functional neuroimaging has been a mainstay of human neuroscience for the past 25 years. Interpretation of fMRI data has often occurred within knowledge frameworks crafted by experts, which have the potential to amplify biases that limit the replicability of findings. Here, we employ a computational approach to derive a data-driven framework for neurobiological domains that synthesizes the texts and data of nearly 20,000 human neuroimaging articles. Across multiple levels of domain specificity, the structure-function links within domains better replicate in held-out articles than those mapped from dominant frameworks in neuroscience and psychiatry. We further show that the data-driven framework partitions the literature into modular subfields, for which domains serve as generalizable prototypes of structure-function patterns in single articles. The approach to computational ontology we present here is the most comprehensive characterization of human brain circuits quantifiable with fMRI and may be extended to synthesize other scientific literatures. |
format | Online Article Text |
id | pubmed-8761068 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-87610682022-05-11 A data-driven framework for mapping domains of human neurobiology Beam, Elizabeth Potts, Christopher Poldrack, Russell A. Etkin, Amit Nat Neurosci Article Functional neuroimaging has been a mainstay of human neuroscience for the past 25 years. Interpretation of fMRI data has often occurred within knowledge frameworks crafted by experts, which have the potential to amplify biases that limit the replicability of findings. Here, we employ a computational approach to derive a data-driven framework for neurobiological domains that synthesizes the texts and data of nearly 20,000 human neuroimaging articles. Across multiple levels of domain specificity, the structure-function links within domains better replicate in held-out articles than those mapped from dominant frameworks in neuroscience and psychiatry. We further show that the data-driven framework partitions the literature into modular subfields, for which domains serve as generalizable prototypes of structure-function patterns in single articles. The approach to computational ontology we present here is the most comprehensive characterization of human brain circuits quantifiable with fMRI and may be extended to synthesize other scientific literatures. 2021-12 2021-11-11 /pmc/articles/PMC8761068/ /pubmed/34764476 http://dx.doi.org/10.1038/s41593-021-00948-9 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: https://www.springernature.com/gp/open-research/policies/accepted-manuscript-terms |
spellingShingle | Article Beam, Elizabeth Potts, Christopher Poldrack, Russell A. Etkin, Amit A data-driven framework for mapping domains of human neurobiology |
title | A data-driven framework for mapping domains of human neurobiology |
title_full | A data-driven framework for mapping domains of human neurobiology |
title_fullStr | A data-driven framework for mapping domains of human neurobiology |
title_full_unstemmed | A data-driven framework for mapping domains of human neurobiology |
title_short | A data-driven framework for mapping domains of human neurobiology |
title_sort | data-driven framework for mapping domains of human neurobiology |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761068/ https://www.ncbi.nlm.nih.gov/pubmed/34764476 http://dx.doi.org/10.1038/s41593-021-00948-9 |
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