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Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review

BACKGROUND: Mendelian randomization (MR) studies using Genetic risk scores (GRS) as an instrumental variable (IV) have increasingly been used to control for unmeasured confounding in observational healthcare databases. However, proper reporting of methodological issues is sparse in these studies. We...

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Autores principales: Islam, Shabab Noor, Ahammed, Tanvir, Anjum, Aniqua, Albalawi, Olayan, Uddin, Md. Jamal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761268/
https://www.ncbi.nlm.nih.gov/pubmed/35034628
http://dx.doi.org/10.1186/s12874-022-01504-0
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author Islam, Shabab Noor
Ahammed, Tanvir
Anjum, Aniqua
Albalawi, Olayan
Uddin, Md. Jamal
author_facet Islam, Shabab Noor
Ahammed, Tanvir
Anjum, Aniqua
Albalawi, Olayan
Uddin, Md. Jamal
author_sort Islam, Shabab Noor
collection PubMed
description BACKGROUND: Mendelian randomization (MR) studies using Genetic risk scores (GRS) as an instrumental variable (IV) have increasingly been used to control for unmeasured confounding in observational healthcare databases. However, proper reporting of methodological issues is sparse in these studies. We aimed to review published papers related to MR studies and identify reporting problems. METHODS: We conducted a systematic review using the clinical articles published between 2009 and 2019. We searched PubMed, Scopus, and Embase databases. We retrieved information from every MR study, including the tests performed to evaluate assumptions and the modelling approach used for estimation. Using our inclusion/exclusion criteria, finally, we identified 97 studies to conduct the review according to the PRISMA statement. RESULTS: Only 66 (68%) of the studies empirically verified the first assumption (Relevance assumption), and 40 (41.2%) studies reported the appropriate tests (e.g., R2, F-test) to investigate the association. A total of 35.1% clearly stated and discussed theoretical justifications for the second and third assumptions. 30.9% of the studies used a two-stage least square, and 11.3% used the Wald estimator method for estimating IV. Also, 44.3% of the studies conducted a sensitivity analysis to illuminate the robustness of estimates for violations of the untestable assumptions. CONCLUSIONS: We found that incompleteness of the justification of the assumptions for the instrumental variable in MR studies was a common problem in our selected studies. This may misdirect the findings of the studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01504-0.
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spelling pubmed-87612682022-01-18 Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review Islam, Shabab Noor Ahammed, Tanvir Anjum, Aniqua Albalawi, Olayan Uddin, Md. Jamal BMC Med Res Methodol Research BACKGROUND: Mendelian randomization (MR) studies using Genetic risk scores (GRS) as an instrumental variable (IV) have increasingly been used to control for unmeasured confounding in observational healthcare databases. However, proper reporting of methodological issues is sparse in these studies. We aimed to review published papers related to MR studies and identify reporting problems. METHODS: We conducted a systematic review using the clinical articles published between 2009 and 2019. We searched PubMed, Scopus, and Embase databases. We retrieved information from every MR study, including the tests performed to evaluate assumptions and the modelling approach used for estimation. Using our inclusion/exclusion criteria, finally, we identified 97 studies to conduct the review according to the PRISMA statement. RESULTS: Only 66 (68%) of the studies empirically verified the first assumption (Relevance assumption), and 40 (41.2%) studies reported the appropriate tests (e.g., R2, F-test) to investigate the association. A total of 35.1% clearly stated and discussed theoretical justifications for the second and third assumptions. 30.9% of the studies used a two-stage least square, and 11.3% used the Wald estimator method for estimating IV. Also, 44.3% of the studies conducted a sensitivity analysis to illuminate the robustness of estimates for violations of the untestable assumptions. CONCLUSIONS: We found that incompleteness of the justification of the assumptions for the instrumental variable in MR studies was a common problem in our selected studies. This may misdirect the findings of the studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01504-0. BioMed Central 2022-01-16 /pmc/articles/PMC8761268/ /pubmed/35034628 http://dx.doi.org/10.1186/s12874-022-01504-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Islam, Shabab Noor
Ahammed, Tanvir
Anjum, Aniqua
Albalawi, Olayan
Uddin, Md. Jamal
Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
title Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
title_full Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
title_fullStr Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
title_full_unstemmed Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
title_short Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
title_sort reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761268/
https://www.ncbi.nlm.nih.gov/pubmed/35034628
http://dx.doi.org/10.1186/s12874-022-01504-0
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