Cargando…

Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019

BACKGROUND: Coronavirus disease 2019 (COVID‐19) has had a devastating impact on public health services worldwide. Currently, there are no standard remedies or therapies for COVID‐19. it is important to identify and diagnose COVID‐19 to control the spread. But clinical symptoms of COVID‐19 are very s...

Descripción completa

Detalles Bibliográficos
Autores principales: Dong, Wenxue, Yang, Xu, Li, Jing, Zhang, Zhiying, Liu, Lijun, Zhao, Zhipeng, Kang, Longli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761392/
https://www.ncbi.nlm.nih.gov/pubmed/34859916
http://dx.doi.org/10.1002/jcla.24137
_version_ 1784633516304105472
author Dong, Wenxue
Yang, Xu
Li, Jing
Zhang, Zhiying
Liu, Lijun
Zhao, Zhipeng
Kang, Longli
author_facet Dong, Wenxue
Yang, Xu
Li, Jing
Zhang, Zhiying
Liu, Lijun
Zhao, Zhipeng
Kang, Longli
author_sort Dong, Wenxue
collection PubMed
description BACKGROUND: Coronavirus disease 2019 (COVID‐19) has had a devastating impact on public health services worldwide. Currently, there are no standard remedies or therapies for COVID‐19. it is important to identify and diagnose COVID‐19 to control the spread. But clinical symptoms of COVID‐19 are very similar to those of other respiratory viruses. RESULTS: As a result, the diagnosis of COVID‐19 relies heavily on detecting pathogens. We established a bunch of triplex new TaqMan real‐time PCR assays. Three sets of primers and probes (targeting the ORF1ab, N, and E genes, respectively) are poorly consistent with other human coronaviruses and the human influenza virus. The sensitivity of established PCR assays notices as few as 100 copies per PCR of the ORF1ab, N, and E genes. Meanwhile, standard curves concluded from constant PCR reaction all showed glorious linear correlations between Ct values and the polymer loading copy variety (correlation coefficient (R(2)) of ORF1ab, N, and E genes is 0.996, 0.991, and 0.998, respectively). Surveillance of RNA‐based pseudovirus demonstrated that they were identified to be positive with respect to SARS‐CoV‐2 and that established PCR assays are achievable. CONCLUSION: The assays established provide a smaller reaction volume for diagnosing COVID‐19.
format Online
Article
Text
id pubmed-8761392
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-87613922022-01-20 Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019 Dong, Wenxue Yang, Xu Li, Jing Zhang, Zhiying Liu, Lijun Zhao, Zhipeng Kang, Longli J Clin Lab Anal Research Articles BACKGROUND: Coronavirus disease 2019 (COVID‐19) has had a devastating impact on public health services worldwide. Currently, there are no standard remedies or therapies for COVID‐19. it is important to identify and diagnose COVID‐19 to control the spread. But clinical symptoms of COVID‐19 are very similar to those of other respiratory viruses. RESULTS: As a result, the diagnosis of COVID‐19 relies heavily on detecting pathogens. We established a bunch of triplex new TaqMan real‐time PCR assays. Three sets of primers and probes (targeting the ORF1ab, N, and E genes, respectively) are poorly consistent with other human coronaviruses and the human influenza virus. The sensitivity of established PCR assays notices as few as 100 copies per PCR of the ORF1ab, N, and E genes. Meanwhile, standard curves concluded from constant PCR reaction all showed glorious linear correlations between Ct values and the polymer loading copy variety (correlation coefficient (R(2)) of ORF1ab, N, and E genes is 0.996, 0.991, and 0.998, respectively). Surveillance of RNA‐based pseudovirus demonstrated that they were identified to be positive with respect to SARS‐CoV‐2 and that established PCR assays are achievable. CONCLUSION: The assays established provide a smaller reaction volume for diagnosing COVID‐19. John Wiley and Sons Inc. 2021-12-03 /pmc/articles/PMC8761392/ /pubmed/34859916 http://dx.doi.org/10.1002/jcla.24137 Text en © 2021 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Dong, Wenxue
Yang, Xu
Li, Jing
Zhang, Zhiying
Liu, Lijun
Zhao, Zhipeng
Kang, Longli
Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019
title Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019
title_full Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019
title_fullStr Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019
title_full_unstemmed Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019
title_short Smaller reaction volume of triplex taqman real‐time reverse transcription‐PCR assays for diagnosing coronavirus disease 2019
title_sort smaller reaction volume of triplex taqman real‐time reverse transcription‐pcr assays for diagnosing coronavirus disease 2019
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761392/
https://www.ncbi.nlm.nih.gov/pubmed/34859916
http://dx.doi.org/10.1002/jcla.24137
work_keys_str_mv AT dongwenxue smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019
AT yangxu smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019
AT lijing smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019
AT zhangzhiying smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019
AT liulijun smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019
AT zhaozhipeng smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019
AT kanglongli smallerreactionvolumeoftriplextaqmanrealtimereversetranscriptionpcrassaysfordiagnosingcoronavirusdisease2019