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The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p
BACKGROUND: Androgenetic alopecia (AGA) is an androgen‐dependent polygenic hereditary disease. METHODS: Diseased hair follicles from 5 AGA patients and normal hair follicles from 5 healthy individuals were selected as specimens to carry out whole transcriptome sequencing. Multiple high‐expression ci...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761473/ https://www.ncbi.nlm.nih.gov/pubmed/34788492 http://dx.doi.org/10.1002/jcla.24021 |
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author | Wei, Hanxiao Xu, Xiaoyu Yang, Shuai Liu, Chang Li, Qiang Jin, Peisheng |
author_facet | Wei, Hanxiao Xu, Xiaoyu Yang, Shuai Liu, Chang Li, Qiang Jin, Peisheng |
author_sort | Wei, Hanxiao |
collection | PubMed |
description | BACKGROUND: Androgenetic alopecia (AGA) is an androgen‐dependent polygenic hereditary disease. METHODS: Diseased hair follicles from 5 AGA patients and normal hair follicles from 5 healthy individuals were selected as specimens to carry out whole transcriptome sequencing. Multiple high‐expression circular RNAs (circRNAs) were screened from the diseased group. We further verified the presence of the circRNAs in the clinical specimens by real‐time fluorescence quantitative PCR (qRT‐PCR). RESULTS: In total, 100 circRNAs were significantly upregulated, and 184 circRNAs were significantly downregulated. The top 10 upregulated circRNAs were hsa_circ_0101041, hsa_circ_0001578, hsa_circ_0135062, hsa_circ_0002980, hsa_circ_0005062, hsa_circ_0072688, hsa_circ_0133954, hsa_circ_0001079, hsa_circ_0005974, hsa_circ_0000489. The top 10 downregulated circRNAs were hsa_circ_0001278, hsa_circ_0031482, hsa_circ_0008285, hsa_circ_0003784, hsa_circ_0077096, hsa_circ_0001148, hsa_circ_0006886, hsa_circ_0000638, hsa_circ_0084521, and hsa_circ_0101074. Among top 10 upregulated circRNAs, hsa_circ_0001079 showed significantly high expression via large‐sample verification and clinical application potential. Based on a database comparison and base pairing analysis, we found that has‐miR‐136‐5p bound to hsa_circ_0001079 and that hsa‐miR‐136‐5p had potential binding sites with Wnt5A. CONCLUSION: In summary, through high‐throughput sequencing and bioinformatic analysis, a potential diagnostic marker for alopecia and a key circRNA that might adsorb microRNA (miRNA) through a sponging mechanism, thus mediating alopecia, were discovered in this study. |
format | Online Article Text |
id | pubmed-8761473 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-87614732022-01-20 The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p Wei, Hanxiao Xu, Xiaoyu Yang, Shuai Liu, Chang Li, Qiang Jin, Peisheng J Clin Lab Anal Research Articles BACKGROUND: Androgenetic alopecia (AGA) is an androgen‐dependent polygenic hereditary disease. METHODS: Diseased hair follicles from 5 AGA patients and normal hair follicles from 5 healthy individuals were selected as specimens to carry out whole transcriptome sequencing. Multiple high‐expression circular RNAs (circRNAs) were screened from the diseased group. We further verified the presence of the circRNAs in the clinical specimens by real‐time fluorescence quantitative PCR (qRT‐PCR). RESULTS: In total, 100 circRNAs were significantly upregulated, and 184 circRNAs were significantly downregulated. The top 10 upregulated circRNAs were hsa_circ_0101041, hsa_circ_0001578, hsa_circ_0135062, hsa_circ_0002980, hsa_circ_0005062, hsa_circ_0072688, hsa_circ_0133954, hsa_circ_0001079, hsa_circ_0005974, hsa_circ_0000489. The top 10 downregulated circRNAs were hsa_circ_0001278, hsa_circ_0031482, hsa_circ_0008285, hsa_circ_0003784, hsa_circ_0077096, hsa_circ_0001148, hsa_circ_0006886, hsa_circ_0000638, hsa_circ_0084521, and hsa_circ_0101074. Among top 10 upregulated circRNAs, hsa_circ_0001079 showed significantly high expression via large‐sample verification and clinical application potential. Based on a database comparison and base pairing analysis, we found that has‐miR‐136‐5p bound to hsa_circ_0001079 and that hsa‐miR‐136‐5p had potential binding sites with Wnt5A. CONCLUSION: In summary, through high‐throughput sequencing and bioinformatic analysis, a potential diagnostic marker for alopecia and a key circRNA that might adsorb microRNA (miRNA) through a sponging mechanism, thus mediating alopecia, were discovered in this study. John Wiley and Sons Inc. 2021-11-17 /pmc/articles/PMC8761473/ /pubmed/34788492 http://dx.doi.org/10.1002/jcla.24021 Text en © 2021 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Articles Wei, Hanxiao Xu, Xiaoyu Yang, Shuai Liu, Chang Li, Qiang Jin, Peisheng The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p |
title | The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p |
title_full | The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p |
title_fullStr | The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p |
title_full_unstemmed | The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p |
title_short | The potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐miR‐136‐5p |
title_sort | potential role of hsa_circ_0001079 in androgenetic alopecia via sponging hsa‐mir‐136‐5p |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761473/ https://www.ncbi.nlm.nih.gov/pubmed/34788492 http://dx.doi.org/10.1002/jcla.24021 |
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