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Spatial omics: Navigating to the golden era of cancer research

The idea that tumour microenvironment (TME) is organised in a spatial manner will not surprise many cancer biologists; however, systematically capturing spatial architecture of TME is still not possible until recent decade. The past five years have witnessed a boom in the research of high‐throughput...

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Autores principales: Wu, Yingcheng, Cheng, Yifei, Wang, Xiangdong, Fan, Jia, Gao, Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8764875/
https://www.ncbi.nlm.nih.gov/pubmed/35040595
http://dx.doi.org/10.1002/ctm2.696
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author Wu, Yingcheng
Cheng, Yifei
Wang, Xiangdong
Fan, Jia
Gao, Qiang
author_facet Wu, Yingcheng
Cheng, Yifei
Wang, Xiangdong
Fan, Jia
Gao, Qiang
author_sort Wu, Yingcheng
collection PubMed
description The idea that tumour microenvironment (TME) is organised in a spatial manner will not surprise many cancer biologists; however, systematically capturing spatial architecture of TME is still not possible until recent decade. The past five years have witnessed a boom in the research of high‐throughput spatial techniques and algorithms to delineate TME at an unprecedented level. Here, we review the technological progress of spatial omics and how advanced computation methods boost multi‐modal spatial data analysis. Then, we discussed the potential clinical translations of spatial omics research in precision oncology, and proposed a transfer of spatial ecological principles to cancer biology in spatial data interpretation. So far, spatial omics is placing us in the golden age of spatial cancer research. Further development and application of spatial omics may lead to a comprehensive decoding of the TME ecosystem and bring the current spatiotemporal molecular medical research into an entirely new paradigm.
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spelling pubmed-87648752022-01-24 Spatial omics: Navigating to the golden era of cancer research Wu, Yingcheng Cheng, Yifei Wang, Xiangdong Fan, Jia Gao, Qiang Clin Transl Med Reviews The idea that tumour microenvironment (TME) is organised in a spatial manner will not surprise many cancer biologists; however, systematically capturing spatial architecture of TME is still not possible until recent decade. The past five years have witnessed a boom in the research of high‐throughput spatial techniques and algorithms to delineate TME at an unprecedented level. Here, we review the technological progress of spatial omics and how advanced computation methods boost multi‐modal spatial data analysis. Then, we discussed the potential clinical translations of spatial omics research in precision oncology, and proposed a transfer of spatial ecological principles to cancer biology in spatial data interpretation. So far, spatial omics is placing us in the golden age of spatial cancer research. Further development and application of spatial omics may lead to a comprehensive decoding of the TME ecosystem and bring the current spatiotemporal molecular medical research into an entirely new paradigm. John Wiley and Sons Inc. 2022-01-18 /pmc/articles/PMC8764875/ /pubmed/35040595 http://dx.doi.org/10.1002/ctm2.696 Text en © 2022 The Authors. Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reviews
Wu, Yingcheng
Cheng, Yifei
Wang, Xiangdong
Fan, Jia
Gao, Qiang
Spatial omics: Navigating to the golden era of cancer research
title Spatial omics: Navigating to the golden era of cancer research
title_full Spatial omics: Navigating to the golden era of cancer research
title_fullStr Spatial omics: Navigating to the golden era of cancer research
title_full_unstemmed Spatial omics: Navigating to the golden era of cancer research
title_short Spatial omics: Navigating to the golden era of cancer research
title_sort spatial omics: navigating to the golden era of cancer research
topic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8764875/
https://www.ncbi.nlm.nih.gov/pubmed/35040595
http://dx.doi.org/10.1002/ctm2.696
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