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MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
Malignant melanoma (MM) recognition in whole-slide images (WSIs) is challenging due to the huge image size of billions of pixels and complex visual characteristics. We propose a novel automatic melanoma recognition method based on the multi-scale features and probability map, named MPMR. First, we i...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8766801/ https://www.ncbi.nlm.nih.gov/pubmed/35071264 http://dx.doi.org/10.3389/fmed.2021.775587 |
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author | Zhang, Dong Han, Hongcheng Du, Shaoyi Zhu, Longfei Yang, Jing Wang, Xijing Wang, Lin Xu, Meifeng |
author_facet | Zhang, Dong Han, Hongcheng Du, Shaoyi Zhu, Longfei Yang, Jing Wang, Xijing Wang, Lin Xu, Meifeng |
author_sort | Zhang, Dong |
collection | PubMed |
description | Malignant melanoma (MM) recognition in whole-slide images (WSIs) is challenging due to the huge image size of billions of pixels and complex visual characteristics. We propose a novel automatic melanoma recognition method based on the multi-scale features and probability map, named MPMR. First, we introduce the idea of breaking up the WSI into patches to overcome the difficult-to-calculate problem of WSIs with huge sizes. Second, to obtain and visualize the recognition result of MM tissues in WSIs, a probability mapping method is proposed to generate the mask based on predicted categories, confidence probabilities, and location information of patches. Third, considering that the pathological features related to melanoma are at different scales, such as tissue, cell, and nucleus, and to enhance the representation of multi-scale features is important for melanoma recognition, we construct a multi-scale feature fusion architecture by additional branch paths and shortcut connections, which extracts the enriched lesion features from low-level features containing more detail information and high-level features containing more semantic information. Fourth, to improve the extraction feature of the irregular-shaped lesion and focus on essential features, we reconstructed the residual blocks by a deformable convolution and channel attention mechanism, which further reduces information redundancy and noisy features. The experimental results demonstrate that the proposed method outperforms the compared algorithms, and it has a potential for practical applications in clinical diagnosis. |
format | Online Article Text |
id | pubmed-8766801 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-87668012022-01-20 MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition Zhang, Dong Han, Hongcheng Du, Shaoyi Zhu, Longfei Yang, Jing Wang, Xijing Wang, Lin Xu, Meifeng Front Med (Lausanne) Medicine Malignant melanoma (MM) recognition in whole-slide images (WSIs) is challenging due to the huge image size of billions of pixels and complex visual characteristics. We propose a novel automatic melanoma recognition method based on the multi-scale features and probability map, named MPMR. First, we introduce the idea of breaking up the WSI into patches to overcome the difficult-to-calculate problem of WSIs with huge sizes. Second, to obtain and visualize the recognition result of MM tissues in WSIs, a probability mapping method is proposed to generate the mask based on predicted categories, confidence probabilities, and location information of patches. Third, considering that the pathological features related to melanoma are at different scales, such as tissue, cell, and nucleus, and to enhance the representation of multi-scale features is important for melanoma recognition, we construct a multi-scale feature fusion architecture by additional branch paths and shortcut connections, which extracts the enriched lesion features from low-level features containing more detail information and high-level features containing more semantic information. Fourth, to improve the extraction feature of the irregular-shaped lesion and focus on essential features, we reconstructed the residual blocks by a deformable convolution and channel attention mechanism, which further reduces information redundancy and noisy features. The experimental results demonstrate that the proposed method outperforms the compared algorithms, and it has a potential for practical applications in clinical diagnosis. Frontiers Media S.A. 2022-01-05 /pmc/articles/PMC8766801/ /pubmed/35071264 http://dx.doi.org/10.3389/fmed.2021.775587 Text en Copyright © 2022 Zhang, Han, Du, Zhu, Yang, Wang, Wang and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Zhang, Dong Han, Hongcheng Du, Shaoyi Zhu, Longfei Yang, Jing Wang, Xijing Wang, Lin Xu, Meifeng MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition |
title | MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition |
title_full | MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition |
title_fullStr | MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition |
title_full_unstemmed | MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition |
title_short | MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition |
title_sort | mpmr: multi-scale feature and probability map for melanoma recognition |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8766801/ https://www.ncbi.nlm.nih.gov/pubmed/35071264 http://dx.doi.org/10.3389/fmed.2021.775587 |
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