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MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition

Malignant melanoma (MM) recognition in whole-slide images (WSIs) is challenging due to the huge image size of billions of pixels and complex visual characteristics. We propose a novel automatic melanoma recognition method based on the multi-scale features and probability map, named MPMR. First, we i...

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Detalles Bibliográficos
Autores principales: Zhang, Dong, Han, Hongcheng, Du, Shaoyi, Zhu, Longfei, Yang, Jing, Wang, Xijing, Wang, Lin, Xu, Meifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8766801/
https://www.ncbi.nlm.nih.gov/pubmed/35071264
http://dx.doi.org/10.3389/fmed.2021.775587
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author Zhang, Dong
Han, Hongcheng
Du, Shaoyi
Zhu, Longfei
Yang, Jing
Wang, Xijing
Wang, Lin
Xu, Meifeng
author_facet Zhang, Dong
Han, Hongcheng
Du, Shaoyi
Zhu, Longfei
Yang, Jing
Wang, Xijing
Wang, Lin
Xu, Meifeng
author_sort Zhang, Dong
collection PubMed
description Malignant melanoma (MM) recognition in whole-slide images (WSIs) is challenging due to the huge image size of billions of pixels and complex visual characteristics. We propose a novel automatic melanoma recognition method based on the multi-scale features and probability map, named MPMR. First, we introduce the idea of breaking up the WSI into patches to overcome the difficult-to-calculate problem of WSIs with huge sizes. Second, to obtain and visualize the recognition result of MM tissues in WSIs, a probability mapping method is proposed to generate the mask based on predicted categories, confidence probabilities, and location information of patches. Third, considering that the pathological features related to melanoma are at different scales, such as tissue, cell, and nucleus, and to enhance the representation of multi-scale features is important for melanoma recognition, we construct a multi-scale feature fusion architecture by additional branch paths and shortcut connections, which extracts the enriched lesion features from low-level features containing more detail information and high-level features containing more semantic information. Fourth, to improve the extraction feature of the irregular-shaped lesion and focus on essential features, we reconstructed the residual blocks by a deformable convolution and channel attention mechanism, which further reduces information redundancy and noisy features. The experimental results demonstrate that the proposed method outperforms the compared algorithms, and it has a potential for practical applications in clinical diagnosis.
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spelling pubmed-87668012022-01-20 MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition Zhang, Dong Han, Hongcheng Du, Shaoyi Zhu, Longfei Yang, Jing Wang, Xijing Wang, Lin Xu, Meifeng Front Med (Lausanne) Medicine Malignant melanoma (MM) recognition in whole-slide images (WSIs) is challenging due to the huge image size of billions of pixels and complex visual characteristics. We propose a novel automatic melanoma recognition method based on the multi-scale features and probability map, named MPMR. First, we introduce the idea of breaking up the WSI into patches to overcome the difficult-to-calculate problem of WSIs with huge sizes. Second, to obtain and visualize the recognition result of MM tissues in WSIs, a probability mapping method is proposed to generate the mask based on predicted categories, confidence probabilities, and location information of patches. Third, considering that the pathological features related to melanoma are at different scales, such as tissue, cell, and nucleus, and to enhance the representation of multi-scale features is important for melanoma recognition, we construct a multi-scale feature fusion architecture by additional branch paths and shortcut connections, which extracts the enriched lesion features from low-level features containing more detail information and high-level features containing more semantic information. Fourth, to improve the extraction feature of the irregular-shaped lesion and focus on essential features, we reconstructed the residual blocks by a deformable convolution and channel attention mechanism, which further reduces information redundancy and noisy features. The experimental results demonstrate that the proposed method outperforms the compared algorithms, and it has a potential for practical applications in clinical diagnosis. Frontiers Media S.A. 2022-01-05 /pmc/articles/PMC8766801/ /pubmed/35071264 http://dx.doi.org/10.3389/fmed.2021.775587 Text en Copyright © 2022 Zhang, Han, Du, Zhu, Yang, Wang, Wang and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Zhang, Dong
Han, Hongcheng
Du, Shaoyi
Zhu, Longfei
Yang, Jing
Wang, Xijing
Wang, Lin
Xu, Meifeng
MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
title MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
title_full MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
title_fullStr MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
title_full_unstemmed MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
title_short MPMR: Multi-Scale Feature and Probability Map for Melanoma Recognition
title_sort mpmr: multi-scale feature and probability map for melanoma recognition
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8766801/
https://www.ncbi.nlm.nih.gov/pubmed/35071264
http://dx.doi.org/10.3389/fmed.2021.775587
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