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PeMNet for Pectoral Muscle Segmentation
SIMPLE SUMMARY: Deep learning has become a popular technique in modern computer-aided (CAD) systems. In breast cancer CAD systems, breast pectoral segmentation is an important procedure to remove unwanted pectoral muscle in the images. In recent decades, there are numerous studies aiming at developi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8772963/ https://www.ncbi.nlm.nih.gov/pubmed/35053131 http://dx.doi.org/10.3390/biology11010134 |
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author | Yu, Xiang Wang, Shui-Hua Górriz, Juan Manuel Jiang, Xian-Wei Guttery, David S. Zhang, Yu-Dong |
author_facet | Yu, Xiang Wang, Shui-Hua Górriz, Juan Manuel Jiang, Xian-Wei Guttery, David S. Zhang, Yu-Dong |
author_sort | Yu, Xiang |
collection | PubMed |
description | SIMPLE SUMMARY: Deep learning has become a popular technique in modern computer-aided (CAD) systems. In breast cancer CAD systems, breast pectoral segmentation is an important procedure to remove unwanted pectoral muscle in the images. In recent decades, there are numerous studies aiming at developing efficient and accurate methods for pectoral muscle segmentation. However, some methods heavily rely on manually crafted features that can easily lead to segmentation failure. Moreover, deep learning-based methods are still suffering from poor performance at high computational costs. Therefore, we propose a novel deep learning segmentation framework to provide fast and accurate pectoral muscle segmentation result. In the proposed framework, the novel network architecture enables more useful information to be used and therefore improve the segmentation results. The experimental results using two public datasets validated the effectiveness of the proposed network. ABSTRACT: As an important imaging modality, mammography is considered to be the global gold standard for early detection of breast cancer. Computer-Aided (CAD) systems have played a crucial role in facilitating quicker diagnostic procedures, which otherwise could take weeks if only radiologists were involved. In some of these CAD systems, breast pectoral segmentation is required for breast region partition from breast pectoral muscle for specific analysis tasks. Therefore, accurate and efficient breast pectoral muscle segmentation frameworks are in high demand. Here, we proposed a novel deep learning framework, which we code-named PeMNet, for breast pectoral muscle segmentation in mammography images. In the proposed PeMNet, we integrated a novel attention module called the Global Channel Attention Module (GCAM), which can effectively improve the segmentation performance of Deeplabv3+ using minimal parameter overheads. In GCAM, channel attention maps (CAMs) are first extracted by concatenating feature maps after paralleled global average pooling and global maximum pooling operation. CAMs are then refined and scaled up by multi-layer perceptron (MLP) for elementwise multiplication with CAMs in next feature level. By iteratively repeating this procedure, the global CAMs (GCAMs) are then formed and multiplied elementwise with final feature maps to lead to final segmentation. By doing so, CAMs in early stages of a deep convolution network can be effectively passed on to later stages of the network and therefore leads to better information usage. The experiments on a merged dataset derived from two datasets, INbreast and OPTIMAM, showed that PeMNet greatly outperformed state-of-the-art methods by achieving an IoU of [Formula: see text] , global pixel accuracy of [Formula: see text] , Dice similarity coefficient of [Formula: see text] , and Jaccard of [Formula: see text] , respectively. |
format | Online Article Text |
id | pubmed-8772963 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87729632022-01-21 PeMNet for Pectoral Muscle Segmentation Yu, Xiang Wang, Shui-Hua Górriz, Juan Manuel Jiang, Xian-Wei Guttery, David S. Zhang, Yu-Dong Biology (Basel) Article SIMPLE SUMMARY: Deep learning has become a popular technique in modern computer-aided (CAD) systems. In breast cancer CAD systems, breast pectoral segmentation is an important procedure to remove unwanted pectoral muscle in the images. In recent decades, there are numerous studies aiming at developing efficient and accurate methods for pectoral muscle segmentation. However, some methods heavily rely on manually crafted features that can easily lead to segmentation failure. Moreover, deep learning-based methods are still suffering from poor performance at high computational costs. Therefore, we propose a novel deep learning segmentation framework to provide fast and accurate pectoral muscle segmentation result. In the proposed framework, the novel network architecture enables more useful information to be used and therefore improve the segmentation results. The experimental results using two public datasets validated the effectiveness of the proposed network. ABSTRACT: As an important imaging modality, mammography is considered to be the global gold standard for early detection of breast cancer. Computer-Aided (CAD) systems have played a crucial role in facilitating quicker diagnostic procedures, which otherwise could take weeks if only radiologists were involved. In some of these CAD systems, breast pectoral segmentation is required for breast region partition from breast pectoral muscle for specific analysis tasks. Therefore, accurate and efficient breast pectoral muscle segmentation frameworks are in high demand. Here, we proposed a novel deep learning framework, which we code-named PeMNet, for breast pectoral muscle segmentation in mammography images. In the proposed PeMNet, we integrated a novel attention module called the Global Channel Attention Module (GCAM), which can effectively improve the segmentation performance of Deeplabv3+ using minimal parameter overheads. In GCAM, channel attention maps (CAMs) are first extracted by concatenating feature maps after paralleled global average pooling and global maximum pooling operation. CAMs are then refined and scaled up by multi-layer perceptron (MLP) for elementwise multiplication with CAMs in next feature level. By iteratively repeating this procedure, the global CAMs (GCAMs) are then formed and multiplied elementwise with final feature maps to lead to final segmentation. By doing so, CAMs in early stages of a deep convolution network can be effectively passed on to later stages of the network and therefore leads to better information usage. The experiments on a merged dataset derived from two datasets, INbreast and OPTIMAM, showed that PeMNet greatly outperformed state-of-the-art methods by achieving an IoU of [Formula: see text] , global pixel accuracy of [Formula: see text] , Dice similarity coefficient of [Formula: see text] , and Jaccard of [Formula: see text] , respectively. MDPI 2022-01-14 /pmc/articles/PMC8772963/ /pubmed/35053131 http://dx.doi.org/10.3390/biology11010134 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yu, Xiang Wang, Shui-Hua Górriz, Juan Manuel Jiang, Xian-Wei Guttery, David S. Zhang, Yu-Dong PeMNet for Pectoral Muscle Segmentation |
title | PeMNet for Pectoral Muscle Segmentation |
title_full | PeMNet for Pectoral Muscle Segmentation |
title_fullStr | PeMNet for Pectoral Muscle Segmentation |
title_full_unstemmed | PeMNet for Pectoral Muscle Segmentation |
title_short | PeMNet for Pectoral Muscle Segmentation |
title_sort | pemnet for pectoral muscle segmentation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8772963/ https://www.ncbi.nlm.nih.gov/pubmed/35053131 http://dx.doi.org/10.3390/biology11010134 |
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