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Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa
SIMPLE SUMMARY: The small ubiquitin-related modifier genes regulate the function of the cellular proteins, which are associated with cell stress-tolerance. Identification and understanding the functional localization of these genes are very important to mitigate the stresses. In this study, we ident...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8772976/ https://www.ncbi.nlm.nih.gov/pubmed/35053052 http://dx.doi.org/10.3390/biology11010053 |
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author | Ibrahim, Eid I. Attia, Kotb A. Ghazy, Abdelhalim I. Itoh, Kimiko Almajhdi, Fahad N. Al-Doss, Abdullah A. |
author_facet | Ibrahim, Eid I. Attia, Kotb A. Ghazy, Abdelhalim I. Itoh, Kimiko Almajhdi, Fahad N. Al-Doss, Abdullah A. |
author_sort | Ibrahim, Eid I. |
collection | PubMed |
description | SIMPLE SUMMARY: The small ubiquitin-related modifier genes regulate the function of the cellular proteins, which are associated with cell stress-tolerance. Identification and understanding the functional localization of these genes are very important to mitigate the stresses. In this study, we identified a novel small ubiquitin-related modifier gene and studied its functional localization in the cell. This new finding will be very valuable in increasing our understanding of the mechanism of stress-tolerance. ABSTRACT: Small ubiquitin-related modifier (SUMO) regulates the cellular function of diverse proteins through post-translational modifications. The current study defined a new homolog of SUMO genes in the rice genome and named it OsSUMO7. Putative protein analysis of OsSUMO7 detected SUMOylation features, including di-glycine (GG) and consensus motifs (ΨKXE/D) for the SUMOylation site. Phylogenetic analysis demonstrated the high homology of OsSUMO7 with identified rice SUMO genes, which indicates that the OsSUMO7 gene is an evolutionarily conserved SUMO member. RT-PCR analysis revealed that OsSUMO7 was constitutively expressed in all plant organs. Bioinformatic analysis defined the physicochemical properties and structural model prediction of OsSUMO7 proteins. A red fluorescent protein (DsRed), fused with the OsSUMO7 protein, was expressed and localized mainly in the nucleus and formed nuclear subdomain structures. The fusion proteins of SUMO-conjugating enzymes with the OsSUMO7 protein were co-expressed and co-localized in the nucleus and formed nuclear subdomains. This indicated that the OsSUMO7 precursor is processed, activated, and transported to the nucleus through the SUMOylation system of the plant cell. |
format | Online Article Text |
id | pubmed-8772976 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87729762022-01-21 Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa Ibrahim, Eid I. Attia, Kotb A. Ghazy, Abdelhalim I. Itoh, Kimiko Almajhdi, Fahad N. Al-Doss, Abdullah A. Biology (Basel) Article SIMPLE SUMMARY: The small ubiquitin-related modifier genes regulate the function of the cellular proteins, which are associated with cell stress-tolerance. Identification and understanding the functional localization of these genes are very important to mitigate the stresses. In this study, we identified a novel small ubiquitin-related modifier gene and studied its functional localization in the cell. This new finding will be very valuable in increasing our understanding of the mechanism of stress-tolerance. ABSTRACT: Small ubiquitin-related modifier (SUMO) regulates the cellular function of diverse proteins through post-translational modifications. The current study defined a new homolog of SUMO genes in the rice genome and named it OsSUMO7. Putative protein analysis of OsSUMO7 detected SUMOylation features, including di-glycine (GG) and consensus motifs (ΨKXE/D) for the SUMOylation site. Phylogenetic analysis demonstrated the high homology of OsSUMO7 with identified rice SUMO genes, which indicates that the OsSUMO7 gene is an evolutionarily conserved SUMO member. RT-PCR analysis revealed that OsSUMO7 was constitutively expressed in all plant organs. Bioinformatic analysis defined the physicochemical properties and structural model prediction of OsSUMO7 proteins. A red fluorescent protein (DsRed), fused with the OsSUMO7 protein, was expressed and localized mainly in the nucleus and formed nuclear subdomain structures. The fusion proteins of SUMO-conjugating enzymes with the OsSUMO7 protein were co-expressed and co-localized in the nucleus and formed nuclear subdomains. This indicated that the OsSUMO7 precursor is processed, activated, and transported to the nucleus through the SUMOylation system of the plant cell. MDPI 2021-12-31 /pmc/articles/PMC8772976/ /pubmed/35053052 http://dx.doi.org/10.3390/biology11010053 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ibrahim, Eid I. Attia, Kotb A. Ghazy, Abdelhalim I. Itoh, Kimiko Almajhdi, Fahad N. Al-Doss, Abdullah A. Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa |
title | Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa |
title_full | Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa |
title_fullStr | Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa |
title_full_unstemmed | Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa |
title_short | Molecular Characterization and Functional Localization of a Novel SUMOylation Gene in Oryza sativa |
title_sort | molecular characterization and functional localization of a novel sumoylation gene in oryza sativa |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8772976/ https://www.ncbi.nlm.nih.gov/pubmed/35053052 http://dx.doi.org/10.3390/biology11010053 |
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