Cargando…

Identification of Copy Number Variations and Genetic Diversity in Italian Insular Sheep Breeds

SIMPLE SUMMARY: The aim of this work is to identify CNVs and perform a CNV-based population genetics analysis in five Italian sheep breeds (Barbaresca, Comisana, Pinzirita, Sarda, and Valle del Belìce). We identified 10,207 CNVs and 365 CNV regions (CNVRs). The different approaches used to disclose...

Descripción completa

Detalles Bibliográficos
Autores principales:	Di Gerlando, Rosalia, Mastrangelo, Salvatore, Tolone, Marco, Rizzuto, Ilaria, Sutera, Anna Maria, Moscarelli, Angelo, Portolano, Baldassare, Sardina, Maria Teresa
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8773107/ https://www.ncbi.nlm.nih.gov/pubmed/35049839 http://dx.doi.org/10.3390/ani12020217

Ejemplares similares

Genomic Structural Diversity in Local Goats: Analysis of Copy-Number Variations
por: Di Gerlando, Rosalia, et al.
Publicado: (2020)

Genome-Wide Association Study Identifies New Candidate Markers for Somatic Cells Score in a Local Dairy Sheep
por: Sutera, Anna Maria, et al.
Publicado: (2021)

Genome wide linkage disequilibrium and genetic structure in Sicilian dairy sheep breeds
por: Mastrangelo, Salvatore, et al.
Publicado: (2014)

Genome-Wide Patterns of Homozygosity Reveal the Conservation Status in Five Italian Goat Populations
por: Mastrangelo, Salvatore, et al.
Publicado: (2021)

Genome-wide scan for runs of homozygosity identifies potential candidate genes associated with local adaptation in Valle del Belice sheep
por: Mastrangelo, Salvatore, et al.
Publicado: (2017)

High-density SNP markers elucidate the genetic divergence and population structure of Noticiana sheep breed in the Mediterranean context
por: Chessari, Giorgio, et al.
Publicado: (2023)

Detection of genomic regions underlying milk production traits in Valle del Belice dairy sheep using regional heritability mapping
por: Sutera, Anna Maria, et al.
Publicado: (2021)

Genomic Tools for the Characterization of Local Animal Genetic Resources: Application in Mascaruna Goat
por: Tolone, Marco, et al.
Publicado: (2022)

Genome-wide association study between CNVs and milk production traits in Valle del Belice sheep
por: Di Gerlando, Rosalia, et al.
Publicado: (2019)

High-density single nucleotide polymorphism markers reveal the population structure of 2 local chicken genetic resources
por: Tolone, Marco, et al.
Publicado: (2023)

A Genome-Wide Detection of Copy Number Variations Using SNP Genotyping Arrays in Braque Français Type Pyrénées Dogs
por: Di Gerlando, Rosalia, et al.
Publicado: (2019)

Relationship between inbreeding and milk production traits in two Italian dairy sheep breeds
por: Cesarani, Alberto, et al.
Publicado: (2022)

Weighted Single-Step Genome-Wide Association Study Uncovers Known and Novel Candidate Genomic Regions for Milk Production Traits and Somatic Cell Score in Valle del Belice Dairy Sheep
por: Mohammadi, Hossein, et al.
Publicado: (2022)

Refining the genetic structure and relationships of European cattle breeds through meta-analysis of worldwide genomic SNP data, focusing on Italian cattle
por: Mastrangelo, Salvatore, et al.
Publicado: (2020)

Assessment of genetic variation for pathogen-specific mastitis resistance in Valle del Belice dairy sheep
por: Tolone, Marco, et al.
Publicado: (2016)

Conservation status and historical relatedness of Italian cattle breeds
por: Mastrangelo, Salvatore, et al.
Publicado: (2018)

Genome-wide identification of copy number variation and association with fat deposition in thin and fat-tailed sheep breeds
por: Taghizadeh, Shadan, et al.
Publicado: (2022)

Copy Number Variants in Four Italian Turkey Breeds
por: Strillacci, Maria Giuseppina, et al.
Publicado: (2021)

Novel and known signals of selection for fat deposition in domestic sheep breeds from Africa and Eurasia
por: Mastrangelo, Salvatore, et al.
Publicado: (2019)

A Thorough Investigation of the Microbiological, Physicochemical, and Sensory Properties of Ewe’s Yoghurt Fermented by a Selected Multi-Strain Starter Culture
por: Garofalo, Giuliana, et al.
Publicado: (2023)

An initial comparative map of copy number variations in the goat (Capra hircus) genome
por: Fontanesi, Luca, et al.
Publicado: (2010)

Genome-wide analysis reveals the patterns of genetic diversity and population structure of 8 Italian local chicken breeds
por: Cendron, F., et al.
Publicado: (2020)

How Geography and Climate Shaped the Genomic Diversity of Italian Local Cattle and Sheep Breeds
por: Senczuk, Gabriele, et al.
Publicado: (2022)

Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
por: Wang, Xiaogang, et al.
Publicado: (2019)

Genetic parameters for somatic cell score according to udder infection status in Valle del Belice dairy sheep and impact of imperfect diagnosis of infection
por: Riggio, Valentina, et al.
Publicado: (2010)

The hairless (hr) gene is involved in the congenital hypotrichosis of Valle del Belice sheep
por: Finocchiaro, Raffaella, et al.
Publicado: (2003)

The genetic heritage of Alpine local cattle breeds using genomic SNP data
por: Senczuk, Gabriele, et al.
Publicado: (2020)

Patterns of homozygosity in insular and continental goat breeds
por: Cardoso, Taina F., et al.
Publicado: (2018)

Genome-Wide Analyses Identifies Known and New Markers Responsible of Chicken Plumage Color
por: Mastrangelo, Salvatore, et al.
Publicado: (2020)

Genetic characterization of Egyptian and Italian sheep breeds using mitochondrial DNA
por: Othman, Othman E., et al.
Publicado: (2015)

Genome-Wide SNP Analysis Reveals the Population Structure and the Conservation Status of 23 Italian Chicken Breeds
por: Cendron, Filippo, et al.
Publicado: (2020)

Development of “Quadrello di Ovino”, a Novel Fresh Ewe’s Cheese
por: Garofalo, Giuliana, et al.
Publicado: (2021)

Large scale variation in DNA copy number in chicken breeds
por: Crooijmans, Richard PMA, et al.
Publicado: (2013)

Copy number variations in high and low fertility breeding boars
por: Revay, Tamas, et al.
Publicado: (2015)

Copy number variants in the sheep genome detected using multiple approaches
por: Jenkins, Gemma M., et al.
Publicado: (2016)

Genome-wide evaluation of copy gain and loss variations in three Afghan sheep breeds
por: Moradi, Mohammad Hossein, et al.
Publicado: (2022)

Dietary Variation and Evolution of Gene Copy Number among Dog Breeds
por: Reiter, Taylor, et al.
Publicado: (2016)

Identification and functional characterization of copy number variations in diverse chicken breeds
por: Han, Ruili, et al.
Publicado: (2014)

On the origin and diversification of Podolian cattle breeds: testing scenarios of European colonization using genome-wide SNP data
por: Senczuk, Gabriele, et al.
Publicado: (2021)

Copy Number Variation and Differential Expression of a Protective Endogenous Retrovirus in Sheep
por: Viginier, Barbara, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_mafm08as7gbfspcqgm4fo882sa