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Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma

Trace amine-associated receptors (TAARs) interact with amine compounds called “trace amines” which are present in tissues at low concentrations. Recently, TAARs expression in neoplastic tumors was reported. In this study, TAARs expression was analyzed in public RNAseq datasets in nevi and melanoma s...

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Autores principales: Vaganova, Anastasia N., Kuvarzin, Savelii R., Sycheva, Anastasia M., Gainetdinov, Raul R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774021/
https://www.ncbi.nlm.nih.gov/pubmed/35053262
http://dx.doi.org/10.3390/biom12010114
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author Vaganova, Anastasia N.
Kuvarzin, Savelii R.
Sycheva, Anastasia M.
Gainetdinov, Raul R.
author_facet Vaganova, Anastasia N.
Kuvarzin, Savelii R.
Sycheva, Anastasia M.
Gainetdinov, Raul R.
author_sort Vaganova, Anastasia N.
collection PubMed
description Trace amine-associated receptors (TAARs) interact with amine compounds called “trace amines” which are present in tissues at low concentrations. Recently, TAARs expression in neoplastic tumors was reported. In this study, TAARs expression was analyzed in public RNAseq datasets in nevi and melanoma samples and compared to the expression of dopamine receptors (DRDs) that are known to be involved in melanoma pathogenesis. It was found that all DRDs and TAARs are expressed in nevi at comparable levels. Differential expression analysis demonstrated the drastic decrease of TAAR1, TAAR2, TAAR5, TAAR6, and TAAR8 expression in melanomas compared to benign nevi with only TAAR6, TAAR8, and TAAR9 remaining detectable in malignant tumors. No association of TAARs expression levels and melanoma clinicopathological characteristics was observed. TAARs co-expressed genes in melanoma and nevi were selected by correlation values for comparative pathway enrichment analysis between malignant and benign neoplasia. It was found that coexpression of TAARs with genes inquired in neurotransmitter signaling is lost in melanoma, and tumor-specific association of TAAR6 expression with the mTOR pathway and inflammatory signaling is observed. It is not excluded that TAARs may have certain functions in melanoma pathogenesis, the significance of which to tumor progression is yet to be understood.
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spelling pubmed-87740212022-01-21 Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma Vaganova, Anastasia N. Kuvarzin, Savelii R. Sycheva, Anastasia M. Gainetdinov, Raul R. Biomolecules Article Trace amine-associated receptors (TAARs) interact with amine compounds called “trace amines” which are present in tissues at low concentrations. Recently, TAARs expression in neoplastic tumors was reported. In this study, TAARs expression was analyzed in public RNAseq datasets in nevi and melanoma samples and compared to the expression of dopamine receptors (DRDs) that are known to be involved in melanoma pathogenesis. It was found that all DRDs and TAARs are expressed in nevi at comparable levels. Differential expression analysis demonstrated the drastic decrease of TAAR1, TAAR2, TAAR5, TAAR6, and TAAR8 expression in melanomas compared to benign nevi with only TAAR6, TAAR8, and TAAR9 remaining detectable in malignant tumors. No association of TAARs expression levels and melanoma clinicopathological characteristics was observed. TAARs co-expressed genes in melanoma and nevi were selected by correlation values for comparative pathway enrichment analysis between malignant and benign neoplasia. It was found that coexpression of TAARs with genes inquired in neurotransmitter signaling is lost in melanoma, and tumor-specific association of TAAR6 expression with the mTOR pathway and inflammatory signaling is observed. It is not excluded that TAARs may have certain functions in melanoma pathogenesis, the significance of which to tumor progression is yet to be understood. MDPI 2022-01-11 /pmc/articles/PMC8774021/ /pubmed/35053262 http://dx.doi.org/10.3390/biom12010114 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Vaganova, Anastasia N.
Kuvarzin, Savelii R.
Sycheva, Anastasia M.
Gainetdinov, Raul R.
Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma
title Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma
title_full Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma
title_fullStr Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma
title_full_unstemmed Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma
title_short Deregulation of Trace Amine-Associated Receptors (TAAR) Expression and Signaling Mode in Melanoma
title_sort deregulation of trace amine-associated receptors (taar) expression and signaling mode in melanoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774021/
https://www.ncbi.nlm.nih.gov/pubmed/35053262
http://dx.doi.org/10.3390/biom12010114
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