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Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis
Baccaurea ramiflora Lour. is a popular tropical fruit tree, mainly grown in Myanmar, India, and other tropical or sub-tropical regions where it is commonly referred to as Myanmar grapes, Burmese grapes, or Latkan, respectively. Besides food, B. ramiflora is a traditional medicinal plant with several...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774055/ https://www.ncbi.nlm.nih.gov/pubmed/35071756 http://dx.doi.org/10.1080/23802359.2021.2010616 |
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author | Niu, Ying-feng Liu, Jin |
author_facet | Niu, Ying-feng Liu, Jin |
author_sort | Niu, Ying-feng |
collection | PubMed |
description | Baccaurea ramiflora Lour. is a popular tropical fruit tree, mainly grown in Myanmar, India, and other tropical or sub-tropical regions where it is commonly referred to as Myanmar grapes, Burmese grapes, or Latkan, respectively. Besides food, B. ramiflora is a traditional medicinal plant with several pharmaceutical effects. It is also a crucial component of Chinese Dai medicine. Here, the chloroplast genome of B. ramiflora was sequenced, assembled, and annotated. The complete chloroplast genome is 161,093 bp in length with a GC content of 36.71%. Additionally, it comprises a large single-copy region (LSC) of 89,503 bp, a small single-copy region (SSC) of 18,818 bp, and two inverted repeat regions (IRa and IRb) of 26,386 bp. In total, 128 genes were annotated, including 82 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. Phylogenetic analysis revealed that B. ramiflora is closely related to Phyllanthus emblica, Glochidion chodoense, and Phyllanthus amarus. This study provides useful genomic information for future phylogenetic studies of B. ramiflora and Phyllanthaceae family. |
format | Online Article Text |
id | pubmed-8774055 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-87740552022-01-21 Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis Niu, Ying-feng Liu, Jin Mitochondrial DNA B Resour Mitogenome Announcement Baccaurea ramiflora Lour. is a popular tropical fruit tree, mainly grown in Myanmar, India, and other tropical or sub-tropical regions where it is commonly referred to as Myanmar grapes, Burmese grapes, or Latkan, respectively. Besides food, B. ramiflora is a traditional medicinal plant with several pharmaceutical effects. It is also a crucial component of Chinese Dai medicine. Here, the chloroplast genome of B. ramiflora was sequenced, assembled, and annotated. The complete chloroplast genome is 161,093 bp in length with a GC content of 36.71%. Additionally, it comprises a large single-copy region (LSC) of 89,503 bp, a small single-copy region (SSC) of 18,818 bp, and two inverted repeat regions (IRa and IRb) of 26,386 bp. In total, 128 genes were annotated, including 82 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. Phylogenetic analysis revealed that B. ramiflora is closely related to Phyllanthus emblica, Glochidion chodoense, and Phyllanthus amarus. This study provides useful genomic information for future phylogenetic studies of B. ramiflora and Phyllanthaceae family. Taylor & Francis 2022-01-18 /pmc/articles/PMC8774055/ /pubmed/35071756 http://dx.doi.org/10.1080/23802359.2021.2010616 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Niu, Ying-feng Liu, Jin Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis |
title | Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis |
title_full | Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis |
title_fullStr | Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis |
title_full_unstemmed | Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis |
title_short | Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis |
title_sort | complete chloroplast genome of baccaurea ramiflora and its phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774055/ https://www.ncbi.nlm.nih.gov/pubmed/35071756 http://dx.doi.org/10.1080/23802359.2021.2010616 |
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